RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 DPPA4Q7L190 304 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 OR56B1Q8NGI3 324 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 ANKRD19PQ9H560 264 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 SYNPO2LQ9H987 977 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 NRIP3Q9NQ35 241 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 B3GNT2Q9NY97 397 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 CNIH4Q9P003 139 aa7.19□□□□□ -1.26
SF3B3-201ENST00000302516 MDFIC2A0A1B0GVS7 189 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 FEZF1A0PJY2 475 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 FANCGO15287 622 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 GPR39O43194 453 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 STC2O76061 302 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 OLFM2O95897 454 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 TMEM225BP0DP42 221 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 CSNK1DP48730 415 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 POU3F4P49335 361 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 FOXK1P85037 733 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 C1orf220Q5T0J3 134 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 NKAIN3Q8N8D7 197 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 PPP1R35Q8TAP8 253 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 PAQR8Q8TEZ7 354 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 ZBTB8AQ96BR9 441 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 DPH1Q9BZG8 443 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 CWH43Q9H720 699 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 CD300LBA8K4G0 201 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 GABRPO00591 440 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 LDB2O43679 373 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 CFIP05156 583 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 BTG1P62324 171 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 LTBQ06643 244 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 UBXN2BQ14CS0 331 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 NKPD1Q17RQ9 610 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 RBMS3Q6XE24 437 aaKnown RBP7.18□□□□□ -1.26
SF3B3-201ENST00000302516 NAXEQ8NCW5 288 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 NANPQ8TBE9 248 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 HHLA2Q9UM44 414 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 WNT6Q9Y6F9 365 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 MYO16Q9Y6X6 1858 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 HLA-HP01893 362 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 TRIM23P36406 574 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 HYAL2Q12891 473 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 PTPRCAPQ14761 206 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 ESCO2Q56NI9 601 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 PTRH1Q86Y79 214 aaKnown RBP7.18□□□□□ -1.26
SF3B3-201ENST00000302516 CLECL1Q8IZS7 167 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 NAGSQ8N159 534 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 FAM160A2Q8N612 972 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF611Q8N823 705 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 C4orf36Q96KX1 117 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 KCNK12Q9HB15 430 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 SCN9AQ15858 1988 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 DVL2O14641 736 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 SGCEO43556 437 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 MED6O75586 246 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 FGF18O76093 207 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 TK1P04183 234 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 SNRPGP62308 76 aaKnown RBP7.18□□□□□ -1.26
SF3B3-201ENST00000302516 GCDHQ92947 438 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-201ENST00000302516 POLHQ9Y253 713 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 CPED1A4D0V7 1026 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 BTBD17A6NE02 478 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 M0QZQ0 153 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 DDOSTP39656 456 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 LTB4RQ15722 352 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 KCNJ8Q15842 424 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 PRAMEF8Q5VWM4 474 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 PRAMEF7Q5VXH5 474 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 HORMAD2Q8N7B1 307 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 OR51Q1Q8NH59 317 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 RANGRFQ9HD47 186 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-201ENST00000302516 BABAM2Q9NXR7 383 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 AK6Q9Y3D8 172 aaKnown RBP7.18□□□□□ -1.26
SF3B3-201ENST00000302516 TMEM82A0PJX8 343 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 METTL15A6NJ78 407 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 FZD7O75084 574 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF254O75437 659 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 SDC1P18827 310 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 CBLP22681 906 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 CD68P34810 354 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-201ENST00000302516 ARSDP51689 593 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 PAGE3Q5JUK9 113 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 FAM182AQ5T1J6 154 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF160Q9HCG1 818 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 WDPCPO95876 746 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 P04436 131 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 SYN1P17600 705 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 DCAF7P61962 342 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 APOOLQ6UXV4 268 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 TTLL10Q6ZVT0 673 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 BPIFA2Q96DR5 249 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 APIPQ96GX9 242 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 PLCXD1Q9NUJ7 323 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 POT1Q9NUX5 634 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 TNFRSF10AO00220 468 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 KNG1P01042 644 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 RNF144AP50876 292 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-201ENST00000302516 ZNF252P-AS1Q0IIN9 211 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 RBM39Q14498 530 aaKnown RBP7.18□□□□□ -1.26
SF3B3-201ENST00000302516 CD276Q5ZPR3 534 aa7.18□□□□□ -1.26
SF3B3-201ENST00000302516 SIAH1Q8IUQ4 282 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms