RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 KNL1Q8NG31 2342 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 NR2F1P10589 423 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 HMGA2P52926 109 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 MANFP55145 182 aaKnown RBP13.42□□□□□ -0.26
CDT1-201ENST00000301019 POU4F2Q12837 409 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 PLEKHN1Q494U1 663 aaPredicted RBP13.42□□□□□ -0.26
CDT1-201ENST00000301019 EXOSC6Q5RKV6 272 aaKnown RBP13.42□□□□□ -0.26
CDT1-201ENST00000301019 ANXA8L1Q5VT79 327 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 COMMD6Q7Z4G1 85 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 TMEM17Q86X19 198 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 ZNF683Q8IZ20 524 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 CARNMT1Q8N4J0 409 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 RFLNBQ8N5W9 214 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 KCT2Q8NC54 265 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 ZNF784Q8NCA9 323 aaPredicted RBP13.42□□□□□ -0.26
CDT1-201ENST00000301019 GOT1L1Q8NHS2 421 aaPredicted RBP13.42□□□□□ -0.26
CDT1-201ENST00000301019 CHTF18Q8WVB6 975 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 SMPDL3BQ92485 455 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 TCEAL4Q96EI5 215 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 MGME1Q9BQP7 344 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 ENKD1Q9H0I2 346 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 CSNK1G1Q9HCP0 422 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 MRPS30Q9NP92 439 aaKnown RBP13.42□□□□□ -0.26
CDT1-201ENST00000301019 ASCC3Q8N3C0 2202 aaKnown RBP13.42□□□□□ -0.26
CDT1-201ENST00000301019 A0A087WV48 116 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 GALR3O60755 368 aaPredicted RBP13.42□□□□□ -0.26
CDT1-201ENST00000301019 VSIG10L2P0DP72 767 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 PTH2RP49190 550 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 ANXA11P50995 505 aaKnown RBP13.42□□□□□ -0.26
CDT1-201ENST00000301019 KCNAB1Q14722 419 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 SLC9A5Q14940 896 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 TP53I3Q53FA7 332 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 TMEM201Q5SNT2 666 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 STPG1Q5TH74 334 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 FCRLAQ7L513 359 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 THOC6Q86W42 341 aaKnown RBP13.42□□□□□ -0.26
CDT1-201ENST00000301019 SEMA6DQ8NFY4 1073 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 SNX33Q8WV41 574 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 AUTS2Q8WXX7 1259 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 PDCD1LG2Q9BQ51 273 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 ZNF251Q9BRH9 671 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 DZANK1Q9NVP4 752 aa13.42□□□□□ -0.26
CDT1-201ENST00000301019 GXYLT2A0PJZ3 443 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 CACNB4O00305 520 aaPredicted RBP13.41□□□□□ -0.26
CDT1-201ENST00000301019 FAAHO00519 579 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 OIP5O43482 229 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 SULT1B1O43704 296 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 HIST1H2ABP04908 130 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 TMIGD3P0DMS9 266 aaPredicted RBP13.41□□□□□ -0.26
CDT1-201ENST00000301019 GRPRP30550 384 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 PSMB10P40306 273 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 RFX3P48380 749 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 ART1P52961 327 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 EIF4EBP2Q13542 120 aaPredicted RBP13.41□□□□□ -0.26
CDT1-201ENST00000301019 KLF9Q13886 244 aaPredicted RBP13.41□□□□□ -0.26
CDT1-201ENST00000301019 EIF2S3LQ2VIR3 472 aaKnown RBP13.41□□□□□ -0.26
CDT1-201ENST00000301019 KLHL26Q53HC5 615 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 USP53Q70EK8 1073 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 HIST3H2AQ7L7L0 130 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 DCUN1D3Q8IWE4 304 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 HIST1H2ACQ93077 130 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 ZG16BQ96DA0 208 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 C4orf36Q96KX1 117 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 HINT3Q9NQE9 182 aaKnown RBP13.41□□□□□ -0.26
CDT1-201ENST00000301019 OPN4Q9UHM6 478 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 EXOSC1Q9Y3B2 195 aaKnown RBP13.41□□□□□ -0.26
CDT1-201ENST00000301019 PCDHB1Q9Y5F3 818 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 PMS2P1A4D2B8 440 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 ACOD1A6NK06 481 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 CCND3P30281 292 aaPredicted RBP13.41□□□□□ -0.26
CDT1-201ENST00000301019 RPL9P32969 192 aaKnown RBP13.41□□□□□ -0.26
CDT1-201ENST00000301019 TAS2R41P59536 307 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 PFN3P60673 137 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 OR2B11Q5JQS5 317 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 SVBPQ8N300 66 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 OR4Q3Q8NH05 313 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 ABHD4Q8TB40 342 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 OR14A2Q96R54 314 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 FAM117AQ9C073 453 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 PARP12Q9H0J9 701 aaKnown RBP13.41□□□□□ -0.26
CDT1-201ENST00000301019 C11orf49Q9H6J7 331 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 IL21RQ9HBE5 538 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 TAS2R10Q9NYW0 307 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 FBXO4Q9UKT5 387 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 SH2B3Q9UQQ2 575 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 ALPK3Q96L96 1907 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 DENND4AQ7Z401 1863 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 F5H5P2 479 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 CNR1P21554 472 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 FLT3LGP49771 235 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 CLDN2P57739 230 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 MAT1AQ00266 395 aaKnown RBP13.41□□□□□ -0.26
CDT1-201ENST00000301019 Q3ZCU0 254 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 CD200R1LQ6Q8B3 271 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 MUC20Q8N307 709 aaPredicted RBP13.41□□□□□ -0.26
CDT1-201ENST00000301019 CPXM2Q8N436 756 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 TBC1D19Q8N5T2 526 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 DNAAF1Q8NEP3 725 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 GHSRQ92847 366 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 HHIPQ96QV1 700 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms