RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 FCRLAQ7L513 359 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 LRRC56Q8IYG6 542 aaPredicted RBP13.63□□□□□ -0.23
COL6A2-201ENST00000300527 OR11G2Q8NGC1 345 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 DIO2Q92813 273 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 PINK1Q9BXM7 581 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 GPR160Q9UJ42 338 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 A0A0G2JK05 382 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 G3V3Q6 166 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 CTSLP07711 333 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 TEAD1P28347 426 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 DCTDP32321 178 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 PDX1P52945 283 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 HEPHL1Q6MZM0 1159 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 OR4N5Q8IXE1 308 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 PCSK9Q8NBP7 692 aaKnown RBP13.63□□□□□ -0.23
COL6A2-201ENST00000300527 NUP43Q8NFH3 380 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 OR5M1Q8NGP8 315 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 ZNF559Q9BR84 538 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.63□□□□□ -0.23
COL6A2-201ENST00000300527 C6orf106Q9H6K1 298 aaPredicted RBP13.63□□□□□ -0.23
COL6A2-201ENST00000300527 PCDHB16Q9NRJ7 776 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 C20orf141Q9NUB4 165 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 GNG8Q9UK08 70 aa13.63□□□□□ -0.23
COL6A2-201ENST00000300527 PCYT1BQ9Y5K3 369 aaPredicted RBP13.63□□□□□ -0.23
COL6A2-201ENST00000300527 DGLUCYQ7Z3D6 616 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 RNF180Q86T96 592 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 SMPDL3BQ92485 455 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 KCTD12Q96CX2 325 aaKnown RBP13.62□□□□□ -0.23
COL6A2-201ENST00000300527 FERD3LQ96RJ6 166 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 CD180Q99467 661 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 CPEB1Q9BZB8 566 aaKnown RBP13.62□□□□□ -0.23
COL6A2-201ENST00000300527 STARD7Q9NQZ5 370 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 CPNE7Q9UBL6 633 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 EXOGQ9Y2C4 368 aaKnown RBP13.62□□□□□ -0.23
COL6A2-201ENST00000300527 ATG4BQ9Y4P1 393 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 SCN8AQ9UQD0 1980 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 FAM86C2PA6NEL3 165 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 MFSD2BA6NFX1 497 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 UNC119BA6NIH7 251 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 ID2Q02363 134 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 CRMP1Q14194 572 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 TCTN1Q2MV58 587 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 CLVS2Q5SYC1 327 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 C17orf99Q6UX52 265 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 HDDC3Q8N4P3 179 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 PEX11GQ96HA9 241 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 LRIG1Q96JA1 1093 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 ZNF416Q9BWM5 594 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 LHX9Q9NQ69 397 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 TAS2R10Q9NYW0 307 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 CREBL2O60519 120 aaPredicted RBP13.62□□□□□ -0.23
COL6A2-201ENST00000300527 PPP1R3DO95685 299 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 EPXP11678 715 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 EDNRAP25101 427 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 ADH7P40394 386 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 ANXA11P50995 505 aaKnown RBP13.62□□□□□ -0.23
COL6A2-201ENST00000300527 ERVK-25P63136 954 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 ODF4Q2M2E3 257 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 LINC00303Q3SY05 128 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 THSD4Q6ZMP0 1018 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 SNX33Q8WV41 574 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 RADILQ96JH8 1075 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 ZDHHC5Q9C0B5 715 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 SLC38A1Q9H2H9 487 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 FKRPQ9H9S5 495 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 IL20Q9NYY1 176 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 PPIL1Q9Y3C6 166 aa13.62□□□□□ -0.23
COL6A2-201ENST00000300527 ALPK2Q86TB3 2170 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 IGF2P01344 180 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 CTSAP10619 480 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 ZNF35P13682 527 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 TYRP14679 529 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 FPR3P25089 353 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 SOX2P48431 317 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 MMP15P51511 669 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 KLF9Q13886 244 aaPredicted RBP13.61□□□□□ -0.23
COL6A2-201ENST00000300527 GNA13Q14344 377 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 KRT33BQ14525 404 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 HLXQ14774 488 aaPredicted RBP13.61□□□□□ -0.23
COL6A2-201ENST00000300527 ATXN7L3Q14CW9 347 aaPredicted RBP13.61□□□□□ -0.23
COL6A2-201ENST00000300527 NHLRC3Q5JS37 347 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 FAM26DQ5JW98 314 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 METTL11BQ5VVY1 283 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 OR4C11Q6IEV9 310 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 ZNF793Q6ZN11 406 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 FAM129CQ86XR2 697 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 GID4Q8IVV7 300 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 OR8K3Q8NH51 312 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 ZDHHC1Q8WTX9 485 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 TNFAIP8L1Q8WVP5 186 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 REG4Q9BYZ8 158 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 ACTR6Q9GZN1 396 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 TET1Q8NFU7 2136 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 A0A0G2JPF8 293 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 CENPVL1A0A0U1RR11 272 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 FAM74A7A6NL05 159 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 FAM171A2A8MVW0 826 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 HNRNPCL3B7ZW38 293 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 BET1O15155 118 aa13.61□□□□□ -0.23
COL6A2-201ENST00000300527 THY1P04216 161 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms