RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 C11orf91Q3C1V1 193 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 OR10K2Q6IF99 312 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 FBXW12Q6X9E4 464 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 PDZD3Q86UT5 571 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 ZNF440Q8IYI8 595 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 OR8J2Q8NGG1 315 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 C22orf15Q8WYQ4 148 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 RADILQ96JH8 1075 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 ZNF75AQ96N20 296 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 PKMYT1Q99640 499 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 SIX4Q9UIU6 781 aa13.99□□□□□ -0.17
SCN3B-201ENST00000299333 VSTM2BA6NLU5 285 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 PEX12O00623 359 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 NUDT21O43809 227 aaKnown RBP13.98□□□□□ -0.17
SCN3B-201ENST00000299333 GPX3P22352 226 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 PITX1P78337 314 aaPredicted RBP13.98□□□□□ -0.17
SCN3B-201ENST00000299333 UBE2NLQ5JXB2 153 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 PIP5KL1Q5T9C9 394 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 ZNF704Q6ZNC4 412 aaPredicted RBP13.98□□□□□ -0.17
SCN3B-201ENST00000299333 FCRLAQ7L513 359 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 GPR88Q9GZN0 384 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 SMCO4Q9NRQ5 59 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 FAM212BQ9NTI7 297 aaPredicted RBP13.98□□□□□ -0.17
SCN3B-201ENST00000299333 MRPL22Q9NWU5 206 aaKnown RBP13.98□□□□□ -0.17
SCN3B-201ENST00000299333 AGAP14A8MT82 685 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 EGFP01133 1207 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 CFIP05156 583 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 PNMTP11086 282 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 IVDP26440 423 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 PCGF2P35227 344 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 SIX1Q15475 284 aaPredicted RBP13.98□□□□□ -0.17
SCN3B-201ENST00000299333 MRPL38Q96DV4 380 aaKnown RBP13.98□□□□□ -0.17
SCN3B-201ENST00000299333 TIMM29Q9BSF4 260 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 SMG9Q9H0W8 520 aaKnown RBP13.98□□□□□ -0.17
SCN3B-201ENST00000299333 NIPAL2Q9H841 368 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 MTMR11A4FU01 709 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 S100A8P05109 93 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 KIAA1024LP59773 190 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 SEC61A1P61619 476 aaKnown RBP13.98□□□□□ -0.17
SCN3B-201ENST00000299333 RPS18P62269 152 aaKnown RBP13.98□□□□□ -0.17
SCN3B-201ENST00000299333 ZNF776Q68DI1 518 aaPredicted RBP13.98□□□□□ -0.17
SCN3B-201ENST00000299333 B3GNT9Q6UX72 402 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 GPR137CQ8N3F9 429 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 ST8SIA4Q92187 359 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 SORBS1Q9BX66 1292 aaKnown RBP13.98□□□□□ -0.17
SCN3B-201ENST00000299333 SLC2A9Q9NRM0 540 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 LRP5LA4QPB2 252 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 RNF212BA8MTL3 300 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 MPPED1O15442 326 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 DHRS4L1P0CG22 281 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 KCNE1P15382 129 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 OMGP23515 440 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 GDI1P31150 447 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 HABP2Q14520 560 aaPredicted RBP13.98□□□□□ -0.17
SCN3B-201ENST00000299333 ZNF561Q8N587 486 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 ACTRT3Q9BYD9 372 aa13.98□□□□□ -0.17
SCN3B-201ENST00000299333 SOCS6O14544 535 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 SOCS5O75159 536 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 KCNK2O95069 426 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 ARHGAP19Q14CB8 494 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 ADAM5Q6NVV9 412 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 PLPP5Q8NEB5 264 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 SLC35B4Q969S0 331 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 ZDHHC11Q9H8X9 412 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 OR1A2Q9Y585 309 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 KDM4FA0A1W2PPD8 638 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 TMEM82A0PJX8 343 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 C7orf72A4D263 438 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 FUCA1P04066 466 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 PRPS1P60891 318 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 HTR4Q13639 388 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 Q3ZCU0 254 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 OR2G6Q5TZ20 316 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 DBX2Q6ZNG2 339 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 Q6ZNX1 250 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 NAA11Q9BSU3 229 aaPredicted RBP13.97□□□□□ -0.17
SCN3B-201ENST00000299333 GSTO2Q9H4Y5 243 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 PCDHGA1Q9Y5H4 931 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 TNK1Q13470 666 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 SELPLGQ14242 412 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 GRM7Q14831 915 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 RBMS2Q15434 407 aaKnown RBP13.97□□□□□ -0.17
SCN3B-201ENST00000299333 SOHLH1Q5JUK2 328 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 EEF1A1P5Q5VTE0 462 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 HEPHL1Q6MZM0 1159 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 TCTE3Q8IZS6 198 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 PGAP2Q9UHJ9 254 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 GPR37L1O60883 481 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 APEHP13798 732 aaKnown RBP13.97□□□□□ -0.17
SCN3B-201ENST00000299333 AHRP35869 848 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 RPL13AP40429 203 aaKnown RBP13.97□□□□□ -0.17
SCN3B-201ENST00000299333 SFRP5Q5T4F7 317 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 TMEM164Q5U3C3 297 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 CPZQ66K79 652 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 ZNF100Q8IYN0 542 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 OR4F15Q8NGB8 312 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 OR6F1Q8NGZ6 308 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 RNF141Q8WVD5 230 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 C1orf74Q96LT6 269 aa13.97□□□□□ -0.17
SCN3B-201ENST00000299333 RBFOX1Q9NWB1 397 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms