RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 NKX3-2P78367 333 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 MORN1Q5T089 497 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 TFGQ92734 400 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-201ENST00000295550 MICU1Q9BPX6 476 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 POLMQ9NP87 494 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-201ENST00000295550 NPC1O15118 1278 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 SLC5A2P31639 672 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 MRPS34P82930 218 aaKnown RBP9.29□□□□□ -0.92
COL6A3-201ENST00000295550 PLA2G7Q13093 441 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 CMTM8Q8IZV2 173 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 PELI3Q8N2H9 469 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 TMEM102Q8N9M5 508 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-201ENST00000295550 CRB3Q9BUF7 120 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 SLC25A31Q9H0C2 315 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 PURGQ9UJV8 347 aaKnown RBP9.29□□□□□ -0.92
COL6A3-201ENST00000295550 ANKRD36A6QL64 1941 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 PPP1R2P9O14990 202 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 SYT7O43581 403 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 LSMEM2Q8N112 164 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 LRRC25Q8N386 305 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-201ENST00000295550 UBTD2Q8WUN7 234 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 TMEM98Q9Y2Y6 226 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 PCDHA9Q9Y5H5 950 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 SPO11Q9Y5K1 396 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 POLR2AP24928 1970 aaKnown RBP9.29□□□□□ -0.92
COL6A3-201ENST00000295550 MEIS3P1A6NDR6 274 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 CD300LBA8K4G0 201 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 CYTIPO60759 359 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 ATXN1LP0C7T5 689 aaKnown RBP9.29□□□□□ -0.92
COL6A3-201ENST00000295550 ACPPP15309 386 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 JUNDP17535 347 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 ETV5P41161 510 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 GAB1Q13480 694 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 EIF4HQ15056 248 aaKnown RBP9.29□□□□□ -0.92
COL6A3-201ENST00000295550 UGT3A2Q3SY77 523 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 FRS2Q8WU20 508 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 C3orf30Q96M34 536 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 ANKMY1Q9P2S6 941 aa9.29□□□□□ -0.92
COL6A3-201ENST00000295550 LRP5LA4QPB2 252 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 EMC8O43402 210 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 TAS2R30P59541 319 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 PLCXD2Q0VAA5 305 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 C11orf91Q3C1V1 193 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 ZNF691Q5VV52 312 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 SLC12A9Q9BXP2 914 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 GON7Q9BXV9 100 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 CCDC85CA6NKD9 419 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 H7C1Q1 480 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 PEX12O00623 359 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 CFIP05156 583 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 CRYZQ08257 329 aaKnown RBP9.28□□□□□ -0.92
COL6A3-201ENST00000295550 MMABQ96EY8 250 aaPredicted RBP9.28□□□□□ -0.92
COL6A3-201ENST00000295550 CLMPQ9H6B4 373 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 NPAP1Q9NZP6 1156 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 DRGXA6NNA5 263 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 H7BY64 318 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 ADH1BP00325 375 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 ARSBP15848 533 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 KITLGP21583 273 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 CDK5R2Q13319 367 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 KDM8Q8N371 416 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 ZNF439Q8NDP4 499 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 HUS1BQ8NHY5 278 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 OR5P2Q8WZ92 322 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 SPTSSAQ969W0 71 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 PRAP1Q96NZ9 151 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 CPNE7Q9UBL6 633 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 ZNF860A6NHJ4 632 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 RNASET2O00584 256 aaKnown RBP9.28□□□□□ -0.92
COL6A3-201ENST00000295550 MITFO75030 526 aaPredicted RBP9.28□□□□□ -0.92
COL6A3-201ENST00000295550 POP7O75817 140 aaKnown RBP9.28□□□□□ -0.92
COL6A3-201ENST00000295550 CRHBPP24387 322 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 TMPPEQ6ZT21 453 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 PLPP5Q8NEB5 264 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 OR5D16Q8NGK9 328 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 OR4K13Q8NH42 304 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 C11orf84Q9BUA3 381 aaPredicted RBP9.28□□□□□ -0.92
COL6A3-201ENST00000295550 DZANK1Q9NVP4 752 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 BTNL2Q9UIR0 455 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 PPT1P50897 306 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 SEMA3BQ13214 749 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 MICAQ29983 383 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 PRRT3Q5FWE3 981 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 DCP2Q8IU60 420 aaKnown RBP9.28□□□□□ -0.92
COL6A3-201ENST00000295550 OR4M1Q8NGD0 313 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 FAM212BQ9NTI7 297 aaPredicted RBP9.28□□□□□ -0.92
COL6A3-201ENST00000295550 A0A0D9SG52 128 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 HTR3BO95264 441 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 PRSS56P0CW18 603 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 DLX5P56178 289 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 SLC22A6Q4U2R8 563 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 RFPL4BQ6ZWI9 263 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 LRRC28Q86X40 367 aaPredicted RBP9.28□□□□□ -0.92
COL6A3-201ENST00000295550 CBARPQ8N350 705 aaPredicted RBP9.28□□□□□ -0.92
COL6A3-201ENST00000295550 PAPD5Q8NDF8 572 aaKnown RBP9.28□□□□□ -0.92
COL6A3-201ENST00000295550 BRIX1Q8TDN6 353 aaKnown RBP9.28□□□□□ -0.92
COL6A3-201ENST00000295550 ZNF689Q96CS4 500 aaPredicted RBP9.28□□□□□ -0.92
COL6A3-201ENST00000295550 INPP5KQ9BT40 448 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 NTMT1Q9BV86 223 aa9.28□□□□□ -0.92
COL6A3-201ENST00000295550 PPP3CBP16298 524 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms