RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 PCED1AQ9H1Q7 454 aa12.91□□□□□ -0.34
NXF1-201ENST00000294172 PNO1Q9NRX1 252 aaKnown RBP12.91□□□□□ -0.34
NXF1-201ENST00000294172 TNFRSF10DQ9UBN6 386 aa12.91□□□□□ -0.34
NXF1-201ENST00000294172 RPS6KB2Q9UBS0 482 aa12.91□□□□□ -0.34
NXF1-201ENST00000294172 SIGLEC7Q9Y286 467 aa12.91□□□□□ -0.34
NXF1-201ENST00000294172 WDR87Q6ZQQ6 2873 aa12.91□□□□□ -0.34
NXF1-201ENST00000294172 A8MUA0 341 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 TMEM150CB9EJG8 249 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 PIAS2O75928 621 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 NGFRP08138 427 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 PAICSP22234 425 aaKnown RBP12.9□□□□□ -0.34
NXF1-201ENST00000294172 ATP12AP54707 1039 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 STARD6P59095 220 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 CRYZQ08257 329 aaKnown RBP12.9□□□□□ -0.34
NXF1-201ENST00000294172 FUT7Q11130 342 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 CRTC2Q53ET0 693 aaPredicted RBP12.9□□□□□ -0.34
NXF1-201ENST00000294172 PRAMEF17Q5VTA0 474 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 OAFQ86UD1 273 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 GRAMD2AQ8IUY3 354 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 ZBTB8BQ8NAP8 495 aaPredicted RBP12.9□□□□□ -0.34
NXF1-201ENST00000294172 FAM83FQ8NEG4 500 aaPredicted RBP12.9□□□□□ -0.34
NXF1-201ENST00000294172 C1orf216Q8TAB5 229 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.9□□□□□ -0.34
NXF1-201ENST00000294172 EFHD2Q96C19 240 aaPredicted RBP12.9□□□□□ -0.34
NXF1-201ENST00000294172 LMF1Q96S06 567 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 TBX5Q99593 518 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 ARHGAP9Q9BRR9 750 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 HCAR1Q9BXC0 346 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 PRO3102Q9H379 93 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 CUTCQ9NTM9 273 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 CRNNQ9UBG3 495 aaPredicted RBP12.9□□□□□ -0.34
NXF1-201ENST00000294172 CAB39Q9Y376 341 aaPredicted RBP12.9□□□□□ -0.34
NXF1-201ENST00000294172 UNC13CQ8NB66 2214 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 FAM86C2PA6NEL3 165 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 A8MU76 341 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 H0YIG0 161 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 LALBAP00709 142 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 IMPDH2P12268 514 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 RPS7P62081 194 aaKnown RBP12.9□□□□□ -0.34
NXF1-201ENST00000294172 FOXK2Q01167 660 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 CD300CQ08708 224 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 FGFBP1Q14512 234 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 ZNF141Q15928 474 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 PLK5Q496M5 336 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 LYSMD2Q8IV50 215 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 LNX2Q8N448 690 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 KLHL36Q8N4N3 616 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 ZNF615Q8N8J6 731 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 TNFRSF13CQ96RJ3 184 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 OR51V1Q9H2C8 321 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 SMURF1Q9HCE7 757 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 ERVK13-1Q9NX77 482 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 DHCR7Q9UBM7 475 aaKnown RBP12.9□□□□□ -0.34
NXF1-201ENST00000294172 EPHA6Q9UF33 1036 aa12.9□□□□□ -0.34
NXF1-201ENST00000294172 EXOGQ9Y2C4 368 aaKnown RBP12.9□□□□□ -0.34
NXF1-201ENST00000294172 SMIM30A4D0T7 59 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 SAGE2PA6NJ88 616 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 SLC30A4O14863 429 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 HYAL3O43820 417 aaPredicted RBP12.89□□□□□ -0.35
NXF1-201ENST00000294172 HCN1O60741 890 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 PPP1R3DO95685 299 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 CSTAP01040 98 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 CTBP2P56545 445 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 CSTF1Q05048 431 aaKnown RBP12.89□□□□□ -0.35
NXF1-201ENST00000294172 RUNX1T1Q06455 604 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 TPBGQ13641 420 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 STEAP3Q658P3 488 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 RPL13AP3Q6NVV1 102 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 NIPAL3Q6P499 406 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 KIRREL2Q6UWL6 708 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 MEPCEQ7L2J0 689 aaKnown RBP12.89□□□□□ -0.35
NXF1-201ENST00000294172 ZNF550Q7Z398 422 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 GID4Q8IVV7 300 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 SPEM1Q8N4L4 309 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 ZNF321PQ8N8H1 164 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 GATSQ8NAP1 163 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 PSD4Q8NDX1 1056 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 SPRYD4Q8WW59 207 aaPredicted RBP12.89□□□□□ -0.35
NXF1-201ENST00000294172 RNF31Q96EP0 1072 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 SENP5Q96HI0 755 aaPredicted RBP12.89□□□□□ -0.35
NXF1-201ENST00000294172 WNT16Q9UBV4 365 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 A0A0C4DFX4 3053 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 FITM1A5D6W6 292 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 CLEC2LP0C7M8 214 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 NOS3P29474 1203 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 SLC9A3P48764 834 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 SERTAD2Q14140 314 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 ZNF181Q2M3W8 571 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 PRPF38BQ5VTL8 546 aaKnown RBP12.89□□□□□ -0.35
NXF1-201ENST00000294172 ULK3Q6PHR2 472 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 CADM3Q8N126 398 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 LSMEM1Q8N8F7 131 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 CYB561A3Q8NBI2 242 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 OR4C6Q8NH72 309 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 ART5Q96L15 291 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 KCTD7Q96MP8 289 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 ZNF578Q96N58 590 aaPredicted RBP12.89□□□□□ -0.35
NXF1-201ENST00000294172 TMED9Q9BVK6 235 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 TBC1D17Q9HA65 648 aa12.89□□□□□ -0.35
NXF1-201ENST00000294172 ZNF229Q9UJW7 825 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms