RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 NR4A3Q92570 626 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 RERGQ96A58 199 aaPredicted RBP16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 MARVELD3Q96A59 401 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 ELP4Q96EB1 424 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 CDX2Q99626 313 aaPredicted RBP16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 LYARQ9NX58 379 aaKnown RBP16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 SHISA3A0PJX4 238 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 SMLR1H3BR10 107 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 PLOD3O60568 738 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 ATXN8OSP0DMR3 200 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 SLC6A1P30531 599 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 HOXD11P31277 338 aaPredicted RBP16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 KHKP50053 298 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 ARFIP1P53367 373 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 ZNF155Q12901 538 aaPredicted RBP16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 NUP43Q8NFH3 380 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 OR7G2Q8NG99 324 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 LMX1AQ8TE12 382 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 ZG16BQ96DA0 208 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 WACQ9BTA9 647 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 PIGUQ9H490 435 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 PRDM6Q9NQX0 595 aa16.98■□□□□ 0.31
PDLIM3-201ENST00000284767 OR5K4A6NMS3 321 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 METTL12A8MUP2 240 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 CELP19835 753 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 CD38P28907 300 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 BUD31P41223 144 aaPredicted RBP16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 AP2S1P53680 142 aaPredicted RBP16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 CTBP2P56545 445 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 RPL6Q02878 288 aaKnown RBP16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 GNA13Q14344 377 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 AVL9Q8NBF6 648 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 CAMKVQ8NCB2 501 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 SLC23A1Q9UHI7 598 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 CBLCQ9ULV8 474 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 EXOGQ9Y2C4 368 aaKnown RBP16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 A0A087WUU8 490 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 ZSCAN5BA6NJL1 495 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 SHOXO15266 292 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 B3GALT2O43825 422 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 RFPL3O75679 317 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 BLKP51451 505 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 OOSP2Q86WS3 158 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 GJD3Q8N144 294 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 SERINC2Q96SA4 455 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 PINK1Q9BXM7 581 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 TEX12Q9BXU0 123 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 CTPS2Q9NRF8 586 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 ENTPD2Q9Y5L3 495 aa16.97■□□□□ 0.31
PDLIM3-201ENST00000284767 A0A1W2PR77 199 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 LEUTXA8MZ59 168 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 IGHA1P01876 353 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 CD27P26842 260 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 ANXA11P50995 505 aaKnown RBP16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 AGFG1P52594 562 aaKnown RBP16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 CEBPEQ15744 281 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 ZBTB37Q5TC79 503 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 AADACL4Q5VUY2 407 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 TMEM64Q6YI46 380 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 C11orf74Q86VG3 221 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 CSNK1A1LQ8N752 337 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 ZFPM2Q8WW38 1151 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 HSPA12BQ96MM6 686 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 OR7D2Q96RA2 312 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 JAM3Q9BX67 310 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 HDHD2Q9H0R4 259 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 MED17Q9NVC6 651 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 EXTL2Q9UBQ6 330 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 ELK1P19419 428 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 SHC2P98077 582 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 CSTF1Q05048 431 aaKnown RBP16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 GPR176Q14439 515 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 RNF44Q7L0R7 432 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 ARL14Q8N4G2 192 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 OR4F15Q8NGB8 312 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 ZNF649Q9BS31 505 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 PRR14Q9BWN1 585 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 ING4Q9UNL4 249 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 LIPT1Q9Y234 373 aa16.96■□□□□ 0.31
PDLIM3-201ENST00000284767 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 EMC8O43402 210 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 MTNR1BP49286 362 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 PPM1FP49593 454 aaPredicted RBP16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 TAS2R41P59536 307 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 DEFB133Q30KQ1 61 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 PLA1AQ53H76 456 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 WDR45BQ5MNZ6 344 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 ABHD13Q7L211 337 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 LRRC28Q86X40 367 aaPredicted RBP16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 OSTF1Q92882 214 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 GIMAP5Q96F15 307 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 GPR137Q96N19 417 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 RBCK1Q9BYM8 510 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 KCNN2Q9H2S1 579 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 SLC22A7Q9Y694 548 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 A0A0G2JPF8 293 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 CD8B2A6NJW9 211 aa16.95■□□□□ 0.3
PDLIM3-201ENST00000284767 SLC9B1P1A6NJY1 282 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms