RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 POLHQ9Y253 713 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 ZNF443Q9Y2A4 671 aaPredicted RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 MED16Q9Y2X0 877 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 OR2T1O43869 369 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 DOK2O60496 412 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 PRKRAO75569 313 aaKnown RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 ARSBP15848 533 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 MAGEA6P43360 314 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 EMX1Q04741 257 aaPredicted RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 RPE65Q16518 533 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 OR2G6Q5TZ20 316 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 TANGO2Q6ICL3 276 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 ZNF695Q8IW36 515 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 ZNF740Q8NDX6 193 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 C17orf50Q8WW18 174 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 PHB2Q99623 299 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 CHRDQ9H2X0 955 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 RASD1Q9Y272 281 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 AKAP12Q02952 1782 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 LOC102723532A0A0G2JNH3 316 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 MEGF11A6BM72 1044 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 F10P00742 488 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 F3P13726 295 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 CPMP14384 443 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 ACPPP15309 386 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 POU3F2P20265 443 aaPredicted RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 GABRB3P28472 473 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 PRDX1Q06830 199 aaKnown RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 ZNF322Q6U7Q0 402 aaPredicted RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 TMEM64Q6YI46 380 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 ZNF704Q6ZNC4 412 aaPredicted RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 ATOH1Q92858 354 aaPredicted RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 NT5C3BQ969T7 300 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 B3GNT2Q9NY97 397 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 G3V3Y1 287 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 H7C1C5 153 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 AIFM1O95831 613 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 POLR2IP36954 125 aaKnown RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 TNFRSF4P43489 277 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 LCN6P62502 163 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 FRMPD2BQ6IN97 320 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 EID2Q8N6I1 236 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 CLEC1AQ8NC01 280 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 BEST4Q8NFU0 473 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 C7orf50Q9BRJ6 194 aaKnown RBP10.74□□□□□ -0.69
USP53-201ENST00000274030 C1QTNF2Q9BXJ5 285 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 FAM86C1Q9NVL1 165 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 ASF1BQ9NVP2 202 aa10.74□□□□□ -0.69
USP53-201ENST00000274030 ZNF736B4DX44 427 aaPredicted RBP10.73□□□□□ -0.69
USP53-201ENST00000274030 PRICKLE3O43900 615 aaPredicted RBP10.73□□□□□ -0.69
USP53-201ENST00000274030 NCR1O76036 304 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 CD6P30203 668 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 GCH1P30793 250 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 S100A12P80511 92 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 ARHGAP19Q14CB8 494 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 NR0B2Q15466 257 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 TMEM201Q5SNT2 666 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 LRRC18Q8N456 261 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 GCDHQ92947 438 aaPredicted RBP10.73□□□□□ -0.69
USP53-201ENST00000274030 UTP4Q969X6 686 aaKnown RBP10.73□□□□□ -0.69
USP53-201ENST00000274030 SSX3Q99909 188 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 THAP7Q9BT49 309 aaPredicted RBP10.73□□□□□ -0.69
USP53-201ENST00000274030 ARNT2Q9HBZ2 717 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 LRP6O75581 1613 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 ARNTLO00327 626 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 SC5DO75845 299 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 TPPPO94811 219 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 CPOXP36551 454 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 B3GNT8Q7Z7M8 397 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 SDSLQ96GA7 329 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 CDCA3Q99618 268 aaPredicted RBP10.73□□□□□ -0.69
USP53-201ENST00000274030 SLC6A17Q9H1V8 727 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 ACKR4Q9NPB9 350 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 ABRACLQ9P1F3 81 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 A0A0U1RQK1 487 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 A6NIZ1 184 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 GPR75O95800 540 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 RAP1BP61224 184 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 RAP1AP62834 184 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 KCNJ10P78508 379 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 TDGQ13569 410 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 MRPL2Q5T653 305 aaKnown RBP10.73□□□□□ -0.69
USP53-201ENST00000274030 PRAMEF20Q5VT98 475 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 OR13C2Q8NGS9 318 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 ZNF417Q8TAU3 575 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 TBC1D20Q96BZ9 403 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 HYLS1Q96M11 299 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 OR5B12Q96R08 314 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 GORASP2Q9H8Y8 452 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 ENPP5Q9UJA9 477 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 MT-ND4P03905 459 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 ALDOBP05062 364 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 CDK1P06493 297 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 FAM111BQ6SJ93 734 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 CBLL1Q75N03 491 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 OR56B2PQ8NGI1 322 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 TRMT2BQ96GJ1 504 aaKnown RBP10.73□□□□□ -0.69
USP53-201ENST00000274030 ZNF845Q96IR2 970 aaPredicted RBP10.73□□□□□ -0.69
USP53-201ENST00000274030 HAO2Q9NYQ3 351 aa10.73□□□□□ -0.69
USP53-201ENST00000274030 SLC35A3Q9Y2D2 325 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms