RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 A0A0G2JMP0 313 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 C13orf42A0A1B0GVH6 325 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 SLC5A10A0PJK1 596 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 LATO43561 262 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 POLR2CP19387 275 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 ACTA2P62736 377 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 ACTG2P63267 376 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 HTR4Q13639 388 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 GK2Q14410 553 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 TOR2AQ5JU69 321 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 NDUFAF5Q5TEU4 345 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 LCTLQ6UWM7 567 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 ALKAL2Q6UX46 152 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 CYB561A3Q8NBI2 242 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 KCT2Q8NC54 265 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 OR4M2Q8NGB6 313 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 ADAMTS14Q8WXS8 1223 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 TBC1D20Q96BZ9 403 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 RBM18Q96H35 190 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 DCLRE1CQ96SD1 692 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 SLC38A3Q99624 504 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 KATNB1Q9BVA0 655 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 POTEKPQ9BYX7 375 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 MFFQ9GZY8 342 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 UBE2ZQ9H832 354 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 PELI2Q9HAT8 420 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 ELL3Q9HB65 397 aaPredicted RBP10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 FBXL3Q9UKT7 428 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 SH2B3Q9UQQ2 575 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 FARSAQ9Y285 508 aaKnown RBP10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 NAALAD2Q9Y3Q0 740 aa10.78□□□□□ -0.68
CLSTN3-201ENST00000266546 A8MUA0 341 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 GFYI3L273 518 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 PEX14O75381 377 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 C1orf105O95561 183 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 APBB3O95704 486 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 ART1P52961 327 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 GPR176Q14439 515 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 OCLNQ16625 522 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 TMEM164Q5U3C3 297 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 ADGRF3Q8IZF5 1079 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 OR4E2Q8NGC2 313 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 STOML3Q8TAV4 291 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 SLC41A3Q96GZ6 507 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 TMEM121BQ9BXQ6 578 aaPredicted RBP10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 HHATLQ9HCP6 504 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 RCE1Q9Y256 329 aa10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 ARID1BQ8NFD5 2236 aaPredicted RBP10.77□□□□□ -0.68
CLSTN3-201ENST00000266546 PRAMEF26H0Y7S4 382 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 CASC3O15234 703 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 SC5DO75845 299 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 RLN2P04090 185 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 FURINP09958 794 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 PTBP1P26599 531 aaKnown RBP eCLIP10.77□□□□□ -0.693e-6■■■□□ 16.1
CLSTN3-201ENST00000266546 GNALP38405 381 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 ETV5P41161 510 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 ETV1P50549 477 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 POU4F2Q12837 409 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 CDKN3Q16667 212 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 SYT14P1Q58G82 188 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 FAM76BQ5HYJ3 339 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 CD276Q5ZPR3 534 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 CASTOR1Q8WTX7 329 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 ZNF480Q8WV37 535 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 EID2BQ96D98 161 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 FCRL1Q96LA6 429 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 LINC00615Q96LM1 132 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 TMEM43Q9BTV4 400 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 OR1A2Q9Y585 309 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 IGFBP1P08833 259 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 RAB28P51157 221 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 DLX5P56178 289 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 RAP2BP61225 183 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 MLIPQ5VWP3 458 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 TPRA1Q86W33 373 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 SERPINA12Q8IW75 414 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 LILRA3Q8N6C8 439 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 ACOT11Q8WXI4 607 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 DPH1Q9BZG8 443 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 TRIM64A6NGJ6 449 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 RAF1P04049 648 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 HRGP04196 525 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 HMGN2P05204 90 aaKnown RBP10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 PTPN6P29350 595 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 PXNP49023 591 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 ERVK-25P63136 954 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 HOXC5Q00444 222 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 PGGHGQ32M88 737 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 KLHL26Q53HC5 615 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 ZNF362Q5T0B9 420 aaPredicted RBP10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 PRSS58Q8IYP2 241 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 OR5AR1Q8NGP9 310 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 DPH7Q9BTV6 452 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 PINK1Q9BXM7 581 aa10.77□□□□□ -0.69
CLSTN3-201ENST00000266546 C1orf226A1L170 272 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 GATBO75879 557 aaKnown RBP10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 SHC1P29353 583 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 RORAP35398 523 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 PTH2RP49190 550 aa10.76□□□□□ -0.69
CLSTN3-201ENST00000266546 TSPAN31Q12999 210 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms