RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 PLEKHF2Q9H8W4 249 aa14.39□□□□□ -0.11
USE1-201ENST00000263897 POLE3Q9NRF9 147 aa14.39□□□□□ -0.11
USE1-201ENST00000263897 CLEC4AQ9UMR7 237 aa14.39□□□□□ -0.11
USE1-201ENST00000263897 CELSR1Q9NYQ6 3014 aa14.39□□□□□ -0.11
USE1-201ENST00000263897 CENPVL1A0A0U1RR11 272 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 CCDC154A6NI56 674 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 GJE1A6NN92 205 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 C16orf97H3BN30 126 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 ETV2O00321 342 aaPredicted RBP14.38□□□□□ -0.11
USE1-201ENST00000263897 SS18L1O75177 396 aaPredicted RBP14.38□□□□□ -0.11
USE1-201ENST00000263897 CSTAP01040 98 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 PGRP06401 933 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 NID1P14543 1247 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 DNASE1P24855 282 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 CHI3L1P36222 383 aaPredicted RBP14.38□□□□□ -0.11
USE1-201ENST00000263897 UGT2B10P36537 528 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 LRRC74AQ0VAA2 488 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 SKP2Q13309 424 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 CBFBQ13951 182 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 QPRTQ15274 297 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 MAPK14Q16539 360 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 EIF3MQ7L2H7 374 aaKnown RBP14.38□□□□□ -0.11
USE1-201ENST00000263897 TMCO5AQ8N6Q1 288 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 OR6K3Q8NGY3 331 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 OIT3Q8WWZ8 545 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 ROBO4Q8WZ75 1007 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 ROPN1LQ96C74 230 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 MAELQ96JY0 434 aaKnown RBP14.38□□□□□ -0.11
USE1-201ENST00000263897 PANX1Q96RD7 426 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 FOXC2Q99958 501 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 THUMPD3Q9BV44 507 aaKnown RBP14.38□□□□□ -0.11
USE1-201ENST00000263897 TIGARQ9NQ88 270 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 WDR45Q9Y484 360 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 TESMINQ9Y4I5 508 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 MTORP42345 2549 aa14.38□□□□□ -0.11
USE1-201ENST00000263897 C9JVG2 144 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 KLF11O14901 512 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 C1QCP02747 245 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 PABPC4LP0CB38 370 aaKnown RBP14.37□□□□□ -0.11
USE1-201ENST00000263897 KHKP50053 298 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 SLC9B1Q4ZJI4 515 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 AGBL2Q5U5Z8 902 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 NXNQ6DKJ4 435 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 TYW3Q6IPR3 259 aaKnown RBP14.37□□□□□ -0.11
USE1-201ENST00000263897 ZNF621Q6ZSS3 439 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 TRIML2Q8N7C3 387 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 GLB1L3Q8NCI6 653 aaPredicted RBP14.37□□□□□ -0.11
USE1-201ENST00000263897 ATP6V1C2Q8NEY4 427 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 PIWIL2Q8TC59 973 aaKnown RBP14.37□□□□□ -0.11
USE1-201ENST00000263897 ZNF75CPQ92670 426 aaPredicted RBP14.37□□□□□ -0.11
USE1-201ENST00000263897 CPNE4Q96A23 557 aaPredicted RBP14.37□□□□□ -0.11
USE1-201ENST00000263897 ZG16BQ96DA0 208 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 REXO5Q96IC2 774 aaKnown RBP14.37□□□□□ -0.11
USE1-201ENST00000263897 ZBTB18Q99592 522 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 INPP5KQ9BT40 448 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 CXXC4Q9H2H0 198 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 KLHL28Q9NXS3 571 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 ZNF226Q9NYT6 803 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 PLEKHA6Q9Y2H5 1048 aa14.37□□□□□ -0.11
USE1-201ENST00000263897 FREM1Q5H8C1 2179 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 PRAMEF27A3QJZ7 478 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 HMGN4O00479 90 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 KIAA0513O60268 411 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 SLC22A3O75751 556 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 CYP7B1O75881 506 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 UBTFL6P0CB48 400 aaPredicted RBP14.36□□□□□ -0.11
USE1-201ENST00000263897 IDO1P14902 403 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 PGM1P36871 562 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 CDKN2CP42773 168 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 CCR4P51679 360 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 TXNL4AP83876 142 aaKnown RBP14.36□□□□□ -0.11
USE1-201ENST00000263897 FUT5Q11128 374 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 POU4F3Q15319 338 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 ZNF239Q16600 458 aaKnown RBP14.36□□□□□ -0.11
USE1-201ENST00000263897 TIGD2Q4W5G0 525 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 PDCD4Q53EL6 469 aaKnown RBP14.36□□□□□ -0.11
USE1-201ENST00000263897 FRRS1Q6ZNA5 592 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 MAVSQ7Z434 540 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 RNF130Q86XS8 419 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 ZNF619Q8N2I2 560 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 ST8SIA1Q92185 356 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 ARL8AQ96BM9 186 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 MED18Q9BUE0 208 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 SRXN1Q9BYN0 137 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 AKAP9Q99996 3911 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 ROS1P08922 2347 aa14.36□□□□□ -0.11
USE1-201ENST00000263897 PRR14LQ5THK1 2151 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 UQCRHLA0A096LP55 91 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 A0A1W2PPR1 153 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 RAF1P04049 648 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 IL6P05231 212 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 GSNP06396 782 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 PGCP20142 388 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 CRYGSP22914 178 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 CCKARP32238 428 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 SESN3P58005 492 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 RAC3P60763 192 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 KCNJ10P78508 379 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 CHRNEQ04844 493 aa14.35□□□□□ -0.11
USE1-201ENST00000263897 SELENBP1Q13228 472 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms