RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 VSTM2LQ96N03 204 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 ZNF582Q96NG8 517 aaPredicted RBP12.54□□□□□ -0.4
VMP1-201ENST00000262291 MESP1Q9BRJ9 268 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 OR8D2Q9GZM6 311 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 NRSN2Q9GZP1 204 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 OR10A5Q9H207 317 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 RPRD1BQ9NQG5 326 aaKnown RBP12.54□□□□□ -0.4
VMP1-201ENST00000262291 NLGN3Q9NZ94 848 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 CSNK1G3Q9Y6M4 447 aa12.54□□□□□ -0.4
VMP1-201ENST00000262291 CDC14CA4D256 554 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 C17orf105B2RV13 164 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 SCO1O75880 301 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 OR5F1O95221 314 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 SMSP52788 366 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 COX10Q12887 443 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 GRM7Q14831 915 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 SLC27A4Q6P1M0 643 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 ZNF595Q8IYB9 648 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 CCDC74AQ96AQ1 378 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 UCK1Q9HA47 277 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 ZC3H12DA2A288 527 aaKnown RBP12.53□□□□□ -0.4
VMP1-201ENST00000262291 TRAPPC13A5PLN9 417 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 C12orf71A8MTZ7 269 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 ARHGAP33O14559 1287 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 ZNF749O43361 778 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 MPZL2O60487 215 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 RFPL3O75679 317 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 THBS1P07996 1170 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 SLC15A1P46059 708 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 TUBA1BP68363 451 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 IRF3Q14653 427 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 DECR1Q16698 335 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 EIPR1Q53HC9 387 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 MBOAT2Q6ZWT7 520 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 TUBA1AQ71U36 451 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 LAPTM4BQ86VI4 370 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 B3GNT4Q9C0J1 378 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 MED20Q9H944 212 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 PRDM9Q9NQV7 894 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 TOR4AQ9NXH8 423 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 SH3D21A4FU49 640 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 C17orf51A8MQB3 221 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 CT45A8P0DMV1 189 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 CT45A9P0DMV2 189 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 IFNGR2P38484 337 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 GPR3P46089 330 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 HTR3AP46098 478 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 HSD11B2P80365 405 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 CT45A2Q5DJT8 189 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 CD300LDQ6UXZ3 194 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 CCDC28AQ8IWP9 274 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 LSMEM1Q8N8F7 131 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 OR13C2Q8NGS9 318 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 OR51A7Q8NH64 312 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 OMA1Q96E52 524 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 ZNF285Q96NJ3 590 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 SNX18Q96RF0 628 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 MGLLQ99685 303 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 DHRS9Q9BPW9 319 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 PCED1AQ9H1Q7 454 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 DUSP15Q9H1R2 295 aaPredicted RBP12.53□□□□□ -0.4
VMP1-201ENST00000262291 QPCTLQ9NXS2 382 aa12.53□□□□□ -0.4
VMP1-201ENST00000262291 HEATR5AQ86XA9 2040 aa12.52□□□□□ -0.4
VMP1-201ENST00000262291 TRAV27A0A087WT01 109 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 ISPDA4D126 451 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 DUX1O43812 170 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 GSTM3P21266 225 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 CD79BP40259 229 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 SLC46A3Q7Z3Q1 461 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 ESX1Q8N693 406 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 POGLUT1Q8NBL1 392 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 TMEM239Q8WW34 195 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 PIGKQ92643 395 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 DNAJA3Q96EY1 480 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 SENP5Q96HI0 755 aaPredicted RBP12.52□□□□□ -0.41
VMP1-201ENST00000262291 POLDIP3Q9BY77 421 aaKnown RBP12.52□□□□□ -0.41
VMP1-201ENST00000262291 DCSTAMPQ9H295 470 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 A0A1W2PQ72 361 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 TFECO14948 347 aaPredicted RBP12.52□□□□□ -0.41
VMP1-201ENST00000262291 CSO75390 466 aaKnown RBP12.52□□□□□ -0.41
VMP1-201ENST00000262291 LYPD3O95274 346 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 PTTG1O95997 202 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 ETV5P41161 510 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 RGS6P49758 472 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 ETV1P50549 477 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 SKP1P63208 163 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 ZNF181Q2M3W8 571 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 TCTE1Q5JU00 501 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 PXDC1Q5TGL8 231 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 OR2G6Q5TZ20 316 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 LYSMD4Q5XG99 296 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 GUSBP11Q6P575 273 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 ZCCHC12Q6PEW1 402 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 RASSF6Q6ZTQ3 369 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 GLRX5Q86SX6 157 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 PARP16Q8N5Y8 322 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 BCORP1Q8N888 145 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 OR52I1Q8NGK6 324 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 TMEM80Q96HE8 168 aa12.52□□□□□ -0.41
VMP1-201ENST00000262291 Q96MT0 163 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms