RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 MRPL38Q96DV4 380 aaKnown RBP13.43□□□□□ -0.26
CUX2-201ENST00000261726 THAP7Q9BT49 309 aaPredicted RBP13.43□□□□□ -0.26
CUX2-201ENST00000261726 KDM4EB2RXH2 506 aaPredicted RBP13.43□□□□□ -0.26
CUX2-201ENST00000261726 ONECUT3O60422 494 aaPredicted RBP13.43□□□□□ -0.26
CUX2-201ENST00000261726 SCGB1D1O95968 90 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 HNRNPA2B1P22626 353 aaKnown RBP13.43□□□□□ -0.26
CUX2-201ENST00000261726 CA5AP35218 305 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 FUBP1Q96AE4 644 aaKnown RBP13.43□□□□□ -0.26
CUX2-201ENST00000261726 TPPP3Q9BW30 176 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 OLAHQ9NV23 265 aa13.43□□□□□ -0.26
CUX2-201ENST00000261726 LOC102725191A0A1B0GVB3 256 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 CDC14CA4D256 554 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 MYF6P23409 242 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 TSSK4Q6SA08 328 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 SLC23A2Q9UGH3 650 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 COL16A1Q07092 1604 aaPredicted RBP13.42□□□□□ -0.26
CUX2-201ENST00000261726 IL2RGP31785 369 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 NFATC3Q12968 1075 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 SULT1C2O00338 296 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 NTHL1P78549 312 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 EXOSC7Q15024 291 aaKnown RBP13.42□□□□□ -0.26
CUX2-201ENST00000261726 SBSNQ6UWP8 590 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.42□□□□□ -0.26
CUX2-201ENST00000261726 PINK1Q9BXM7 581 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 NME7Q9Y5B8 376 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 TUSC2O75896 110 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 CLDN6P56747 220 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 HIST2H3PS2Q5TEC6 136 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 SGK3Q96BR1 496 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 ZBTB8AQ96BR9 441 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 EHFQ9NZC4 300 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 HEMK1Q9Y5R4 338 aaPredicted RBP13.42□□□□□ -0.26
CUX2-201ENST00000261726 SRPX2O60687 465 aaPredicted RBP13.42□□□□□ -0.26
CUX2-201ENST00000261726 APEHP13798 732 aaKnown RBP13.42□□□□□ -0.26
CUX2-201ENST00000261726 PDLIM3Q53GG5 364 aaPredicted RBP13.42□□□□□ -0.26
CUX2-201ENST00000261726 ZNF439Q8NDP4 499 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 OR5L1Q8NGL2 311 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 CASD1Q96PB1 797 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 IL23AQ9NPF7 189 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 XIRP1Q702N8 1843 aaKnown RBP13.42□□□□□ -0.26
CUX2-201ENST00000261726 RFPL3O75679 317 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 CLEC3BP05452 202 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 IL32P24001 234 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 PEA15Q15121 130 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 RTP2Q5QGT7 225 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 DESI1Q6ICB0 168 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 TMEM184AQ6ZMB5 413 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 CDRT4Q8N9R6 151 aa13.42□□□□□ -0.26
CUX2-201ENST00000261726 DDX31Q9H8H2 851 aaKnown RBP13.42□□□□□ -0.26
CUX2-201ENST00000261726 KLHL33A6NCF5 533 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 TLE1Q04724 770 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 ZNF33BQ06732 778 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 MBTPS1Q14703 1052 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 SLC9A3R2Q15599 337 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 FXNQ16595 210 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 ACSM3Q53FZ2 586 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 VASNQ6EMK4 673 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 TMEM71Q6P5X7 295 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 BRICD5Q6PL45 260 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 FAM57BQ71RH2 274 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 COX15Q7KZN9 410 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 BTBD2Q9BX70 525 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 SLC25A31Q9H0C2 315 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 LMAN1LQ9HAT1 526 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 INIPQ9NRY2 104 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 A0A0J9YY10 115 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 SURF4O15260 269 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 PTTG1O95997 202 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 IQCF3P0C7M6 154 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 SSTR2P30874 369 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 SELENOWP63302 87 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 LETMD1Q6P1Q0 360 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 KCNIP4Q6PIL6 250 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 PAPD5Q8NDF8 572 aaKnown RBP13.41□□□□□ -0.26
CUX2-201ENST00000261726 DCBLD2Q96PD2 775 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 SLA2Q9H6Q3 261 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 ZNF696Q9H7X3 374 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 PRAMEF27A3QJZ7 478 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 BET1O15155 118 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 ERV3-1Q14264 604 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 NPY5RQ15761 445 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 PRAMEF9Q5VWM5 478 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 ACVR1CQ8NER5 493 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 PSMF1Q92530 271 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 ZNF775Q96BV0 537 aaPredicted RBP13.41□□□□□ -0.26
CUX2-201ENST00000261726 ZNF587Q96SQ5 575 aaPredicted RBP13.41□□□□□ -0.26
CUX2-201ENST00000261726 OR51J1Q9H342 316 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 HRASLSQ9HDD0 168 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 TXNL4BQ9NX01 149 aaKnown RBP13.41□□□□□ -0.26
CUX2-201ENST00000261726 FBXO7Q9Y3I1 522 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 UBR2Q8IWV8 1755 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 WASH4PA8MWX3 477 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 SLC16A7O60669 478 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 MED6O75586 246 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 PRKACAP17612 351 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 RIPPLY1Q0D2K3 151 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 MKXQ8IYA7 352 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 STEAP2Q8NFT2 490 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 MIB2Q96AX9 1013 aa13.41□□□□□ -0.26
CUX2-201ENST00000261726 PRRT1Q99946 306 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms