RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 DSCR10P59022 87 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 TSPAN5P62079 268 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 S100A12P80511 92 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 NAAAQ02083 359 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 FUT7Q11130 342 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 CD226Q15762 336 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 BCL2A1Q16548 175 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 FAM83EQ2M2I3 478 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 EXOC3L2Q2M3D2 409 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 RGS21Q2M5E4 152 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 AGKQ53H12 422 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 NHLRC3Q5JS37 347 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 C10orf120Q5SQS8 335 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 PIP5KL1Q5T9C9 394 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 CWC27Q6UX04 472 aaKnown RBP3.45□□□□□ -1.86
CCDC54-201ENST00000261058 DPY19L2P2Q6ZN68 376 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 RANBP3LQ86VV4 465 aaPredicted RBP3.45□□□□□ -1.86
CCDC54-201ENST00000261058 LRRC75A-AS1Q8N1F1 130 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 TCAIMQ8N3R3 496 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 OR2L2Q8NH16 312 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 CLHC1Q8NHS4 586 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 MITD1Q8WV92 249 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 OR1E3Q8WZA6 343 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 CIDECQ96AQ7 238 aaPredicted RBP3.45□□□□□ -1.86
CCDC54-201ENST00000261058 MCUR1Q96AQ8 359 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 BIRC7Q96CA5 298 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 C12orf66Q96MD2 445 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 DEFB118Q96PH6 123 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 SELENOSQ9BQE4 189 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 C11orf70Q9BRQ4 267 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 NDUFAF3Q9BU61 184 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 FAM107BQ9H098 131 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 SPACA1Q9HBV2 294 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 NEK6Q9HC98 313 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 AMBNQ9NP70 447 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 NRN1Q9NPD7 142 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 IKZF3Q9UKT9 509 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 SLCO1B1Q9Y6L6 691 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 PHLPP2Q6ZVD8 1323 aa3.45□□□□□ -1.86
CCDC54-201ENST00000261058 IGHV3OR16-12A0A075B7B8 117 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 NPIPA5A0A0B4J1W7 369 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 A0A1B0GTH9 108 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 TTC26A0AVF1 554 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 GOLGA8JA6NMD2 632 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 A8MUI8 341 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 NPIPA5E9PKD4 350 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 GOLGA8TH3BQL2 631 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 POLR1CO15160 346 aaPredicted RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 SH3BGRLO75368 114 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 IGHV3-9P01782 118 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 ZCCHC18P0CG32 403 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 GOLGA8HP0CJ92 632 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 PNMA6AP0CW24 399 aaPredicted RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 GNSP15586 552 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 IGFBP5P24593 272 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 DPP4P27487 766 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 ADRA1AP35348 466 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 MATKP42679 507 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 ZNF85Q03923 595 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 DYNC1I2Q13409 638 aaKnown RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 MAPK6Q16659 721 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 IL23RQ5VWK5 629 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 LIPKQ5VXJ0 399 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 CLEC6AQ6EIG7 209 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 CCDC121Q6ZUS5 278 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 STOX1Q6ZVD7 989 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 AKAP14Q86UN6 197 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 PAQR7Q86WK9 346 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 UBE2J2Q8N2K1 259 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 MLKLQ8NB16 471 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 TRPV1Q8NER1 839 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 OR9K2Q8NGE7 335 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 MAIP1Q8WWC4 291 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 FCGR1BQ92637 280 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 EMG1Q92979 244 aaKnown RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 HAVCR1Q96D42 359 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 NPY6RQ99463 290 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 RPP25Q9BUL9 199 aaKnown RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 NUP58Q9BVL2 599 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 GON7Q9BXV9 100 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 ACTR8Q9H981 624 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 MRM3Q9HC36 420 aaKnown RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 SEC14L4Q9UDX3 406 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 CHRNA9Q9UGM1 479 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 HMGXB4Q9UGU5 601 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 IL20RAQ9UHF4 553 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 PURGQ9UJV8 347 aaKnown RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 VANGL2Q9ULK5 521 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 MRPS33Q9Y291 106 aaKnown RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 SLC9A8Q9Y2E8 581 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 RPAP1Q9BWH6 1393 aaPredicted RBP3.44□□□□□ -1.86
CCDC54-201ENST00000261058 CUX2O14529 1486 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 AGRNO00468 2067 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 A0A0U1RQV5 110 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 ZNF840PA6NDX5 716 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 WASH3PC4AMC7 463 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 GOLGA8RI6L899 631 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 RAD51BO15315 384 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 CHMP2AO43633 222 aa3.44□□□□□ -1.86
CCDC54-201ENST00000261058 SNAI1O95863 264 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms