RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 FIGLAQ6QHK4 219 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 ASB18Q6ZVZ8 466 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 BMP8AQ7Z5Y6 402 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 CEACAM19Q7Z692 300 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 TPRA1Q86W33 373 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 OR4N4Q8N0Y3 316 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 DTX3Q8N9I9 347 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 KXD1Q9BQD3 176 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 SLC28A3Q9HAS3 691 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 MEPEQ9NQ76 525 aaPredicted RBP14.11□□□□□ -0.15
DDX56-201ENST00000258772 ZMIZ1Q9ULJ6 1067 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 TMEM5Q9Y2B1 443 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 SLC35A3Q9Y2D2 325 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 MED31Q9Y3C7 131 aa14.11□□□□□ -0.15
DDX56-201ENST00000258772 A0A087WV62 115 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 FGF17O60258 216 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 PTP4A3O75365 173 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 ATP1B1P05026 303 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 CLUP10909 449 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 PRKCAP17252 672 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 NPR2P20594 1047 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 RBMS1P29558 406 aaKnown RBP14.1□□□□□ -0.15
DDX56-201ENST00000258772 GDI1P31150 447 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 PITPNBP48739 271 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 RAB25P57735 213 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 SLC3A1Q07837 685 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 AMZ1Q400G9 498 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 PRRT3Q5FWE3 981 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 CAMKVQ8NCB2 501 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 OR51A7Q8NH64 312 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 TRIM63Q969Q1 353 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 RFT1Q96AA3 541 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 STACQ99469 402 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 TRAF4Q9BUZ4 470 aaPredicted RBP14.1□□□□□ -0.15
DDX56-201ENST00000258772 FOLH1BQ9HBA9 442 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 ADGRL4Q9HBW9 690 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 PILRAQ9UKJ1 303 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 PCOLCE2Q9UKZ9 415 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 TRAV27A0A087WT01 109 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 A0A1B0GVC2 190 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 A6NIN4 97 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 J3QLW9 94 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 RFPL3O75679 317 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 SC5DO75845 299 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 UGT2B7P16662 529 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 ZNF19P17023 458 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 ZNF10P21506 573 aaPredicted RBP14.1□□□□□ -0.15
DDX56-201ENST00000258772 NT5EP21589 574 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 SLC2A5P22732 501 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 ACSL1P33121 698 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 OR12D2P58182 307 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 BTG1P62324 171 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 PLAURQ03405 335 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 ZNF85Q03923 595 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 MAB21L1Q13394 359 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 ZCCHC12Q6PEW1 402 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 ABHD13Q7L211 337 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 TMEM52Q8NDY8 209 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 C17orf47Q8NEP4 570 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 OR4C6Q8NH72 309 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 SMAP2Q8WU79 429 aaPredicted RBP14.1□□□□□ -0.15
DDX56-201ENST00000258772 ARSGQ96EG1 525 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 C4orf36Q96KX1 117 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 GTPBP2Q9BX10 602 aaKnown RBP14.1□□□□□ -0.15
DDX56-201ENST00000258772 ERVMER34-1Q9H9K5 563 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 LYRM4Q9HD34 91 aa14.1□□□□□ -0.15
DDX56-201ENST00000258772 MRPS2Q9Y399 296 aaKnown RBP14.1□□□□□ -0.15
DDX56-201ENST00000258772 A0A0G2JK05 382 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 ARHGEF9O43307 516 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 ZNF780AO75290 641 aaPredicted RBP14.09□□□□□ -0.15
DDX56-201ENST00000258772 POLR2CP19387 275 aaPredicted RBP14.09□□□□□ -0.15
DDX56-201ENST00000258772 MAP3K8P41279 467 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 ACTR1BP42025 376 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 TAS2R43P59537 309 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 KIAA1024LP59773 190 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 ACTR1AP61163 376 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 EXOSC7Q15024 291 aaKnown RBP14.09□□□□□ -0.15
DDX56-201ENST00000258772 ITPRIPL2Q3MIP1 535 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 PLA1AQ53H76 456 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 PRSS41Q7RTY9 318 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 NANOGNBQ7Z5D8 188 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 PXKQ7Z7A4 578 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 GPR135Q8IZ08 494 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 CYB561A3Q8NBI2 242 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 SMPDL3BQ92485 455 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 AKAP1Q92667 903 aaKnown RBP eCLIP14.09□□□□□ -0.15
DDX56-201ENST00000258772 TSACCQ96A04 125 aaPredicted RBP14.09□□□□□ -0.15
DDX56-201ENST00000258772 NECTIN4Q96NY8 510 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 ABHD1Q96SE0 405 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 ABCG5Q9H222 651 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 FBXL4Q9UKA2 621 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 CA5BQ9Y2D0 317 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 F5P12259 2224 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 RIIAD1A6NNX1 92 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 H0Y8X5 98 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 BRINP1O60477 761 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 GPR75O95800 540 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 HOXC4P09017 264 aaPredicted RBP14.09□□□□□ -0.15
DDX56-201ENST00000258772 AHCYP23526 432 aa14.09□□□□□ -0.15
DDX56-201ENST00000258772 GABRA3P34903 492 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms