RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ATP5J2P56134 94 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ID2Q02363 134 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ENPP2Q13822 863 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 C10orf91Q5T1B1 145 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 LAIR2Q6ISS4 152 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ZCCHC23Q6ZST2 131 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 CDHR3Q6ZTQ4 885 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 SLC35D2Q76EJ3 337 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 SPATA19Q7Z5L4 167 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 FAM129CQ86XR2 697 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 C19orf47Q8N9M1 422 aaKnown RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 OR13C5Q8NGS8 318 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 MAPK15Q8TD08 544 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ASB5Q8WWX0 329 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 FOXN4Q96NZ1 517 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ITPAQ9BY32 194 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 RGCCQ9H4X1 137 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ACOT13Q9NPJ3 140 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 DLL4Q9NR61 685 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 HAO2Q9NYQ3 351 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 UPB1Q9UBR1 384 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF490Q9ULM2 529 aaPredicted RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 SSUH2Q9Y2M2 353 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 CCDC88AQ3V6T2 1871 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 LOC105371242A0A075B767 164 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 CYB561D2O14569 222 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 IMPA2O14732 288 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF749O43361 778 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 RP2O75695 350 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 SNAPC5O75971 98 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 AQP8O94778 261 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 THRBP10828 461 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 RHOQP17081 205 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 CXCL3P19876 107 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 MST1P26927 711 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 IL12BP29460 328 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 BRS3P32247 399 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 GALCP54803 685 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 RBPJQ06330 500 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 AGBL4Q5VU57 503 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 FAM131AQ6UXB0 335 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 THSD4Q6ZMP0 1018 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 PTOV1Q86YD1 416 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 DCBLD1Q8N8Z6 715 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 OR13D1Q8NGV5 346 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 OR51A7Q8NH64 312 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 C1orf54Q8WWF1 131 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 WDFY2Q96P53 400 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 MMP19Q99542 508 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 GINS4Q9BRT9 223 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 PIGMQ9H3S5 423 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ABHD16BQ9H3Z7 469 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF629Q9UEG4 869 aaPredicted RBP7.22□□□□□ -1.25
GPNMB-201ENST00000258733 GSTK1Q9Y2Q3 226 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 PCDHA9Q9Y5H5 950 aa7.22□□□□□ -1.25
GPNMB-201ENST00000258733 COL24A1Q17RW2 1714 aa7.21□□□□□ -1.25
GPNMB-201ENST00000258733 ARAP2Q8WZ64 1704 aa7.21□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF541Q9H0D2 1346 aa7.21□□□□□ -1.25
GPNMB-201ENST00000258733 IQCMA0A1B0GVH7 501 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 OR2A25A4D2G3 310 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 CLCA1A8K7I4 914 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 UBFD1O14562 309 aaKnown RBP7.21□□□□□ -1.26
GPNMB-201ENST00000258733 LYRM1O43325 122 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 ADAM20O43506 726 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 TOXO94900 526 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 BPGMP07738 259 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 SELEP16581 610 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 OTX1P32242 354 aaPredicted RBP7.21□□□□□ -1.26
GPNMB-201ENST00000258733 MARCKSL1P49006 195 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 CLK2P49760 499 aaKnown RBP7.21□□□□□ -1.26
GPNMB-201ENST00000258733 BSXQ3C1V8 233 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 GLYR1Q49A26 553 aaPredicted RBP7.21□□□□□ -1.26
GPNMB-201ENST00000258733 SFRP5Q5T4F7 317 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 HIST2H3PS2Q5TEC6 136 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 GPR157Q5UAW9 335 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 LRRC52Q8N7C0 313 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 OR52E1Q8NGJ3 308 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 OR2T35Q8NGX2 323 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 BTN2A2Q8WVV5 523 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 MYLIPQ8WY64 445 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 WNT2BQ93097 391 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 AURKBQ96GD4 344 aaPredicted RBP7.21□□□□□ -1.26
GPNMB-201ENST00000258733 SLC41A3Q96GZ6 507 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 MYOCQ99972 504 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 ACTRT3Q9BYD9 372 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 SLC5A7Q9GZV3 580 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 WWTR1Q9GZV5 400 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 SLC6A20Q9NP91 592 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 SAMD4AQ9UPU9 718 aaKnown RBP7.21□□□□□ -1.26
GPNMB-201ENST00000258733 V9GY48 417 aaPredicted RBP7.21□□□□□ -1.26
GPNMB-201ENST00000258733 CITO14578 2027 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 TRIP11Q15643 1979 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 NRAPQ86VF7 1730 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 AGAP14A8MT82 685 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 F5H0A9 414 aaPredicted RBP7.21□□□□□ -1.26
GPNMB-201ENST00000258733 F6UZH7 168 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 H7C417 338 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 ZNF195O14628 629 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 GPR182O15218 404 aa7.21□□□□□ -1.26
GPNMB-201ENST00000258733 CLIC2O15247 247 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms