RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 LIMS1P48059 325 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 GDI2P50395 445 aaKnown RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 TAS2R43P59537 309 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 RPS21P63220 83 aaKnown RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 CDK5Q00535 292 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 E2F1Q01094 437 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 OC90Q02509 493 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 DUSP2Q05923 314 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 C1orf61Q13536 156 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 RUNX3Q13761 415 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 AMZ1Q400G9 498 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 TMEM201Q5SNT2 666 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 DCST2Q5T1A1 773 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ZNF776Q68DI1 518 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 HBMQ6B0K9 141 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 PYHIN1Q6K0P9 492 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 MFSD12Q6NUT3 480 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ZNF767PQ75MW2 155 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ABHD13Q7L211 337 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ZNF765Q7L2R6 523 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SIAH3Q8IW03 269 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 LRRC56Q8IYG6 542 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 CAMKVQ8NCB2 501 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ABHD4Q8TB40 342 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 TSEN15Q8WW01 171 aaKnown RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 SLC22A18Q96BI1 424 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 WDR34Q96EX3 536 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SIPA1Q96FS4 1042 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 WDFY2Q96P53 400 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 GAL3ST4Q96RP7 486 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ATF6BQ99941 703 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 FN3KQ9H479 309 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 B3GAT2Q9NPZ5 323 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 HRASLS2Q9NWW9 162 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 LYARQ9NX58 379 aaKnown RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 KCMF1Q9P0J7 381 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 FBXL4Q9UKA2 621 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ADAM29Q9UKF5 820 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 RCE1Q9Y256 329 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 LSM2Q9Y333 95 aaKnown RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 ANKRD36A6QL64 1941 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 LOC100509620A0A075B734 347 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 L7N2F9 121 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SURF4O15260 269 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SLC43A1O75387 559 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 PAPLNO95428 1278 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 DBIP07108 87 aaKnown RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 CFL1P23528 166 aaKnown RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 GRK6P43250 576 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 PXNP49023 591 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 ARL4DP49703 201 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 TRA2BP62995 288 aaKnown RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 DGCR2P98153 550 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 FOXK2Q01167 660 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 HSF2Q03933 536 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ENPP2Q13822 863 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ZMYND11Q15326 602 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 RPE65Q16518 533 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SLC25A35Q3KQZ1 300 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 GLYR1Q49A26 553 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 GPR155Q7Z3F1 870 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SPRED2Q7Z698 418 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 UBE3DQ7Z6J8 389 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 TMPRSS12Q86WS5 348 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SLITRK4Q8IW52 837 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 RDH10Q8IZV5 341 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 FAM109AQ8N4B1 249 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 OR5T3Q8NGG3 340 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 OR8S1Q8NH09 359 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 CEP76Q8TAP6 659 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ZFAND1Q8TCF1 268 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 THEM6Q8WUY1 208 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 GIMAP1Q8WWP7 306 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 NR4A3Q92570 626 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 NKD1Q969G9 470 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 MSLNLQ96KJ4 702 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ADAD1Q96M93 576 aaKnown RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 OR14A2Q96R54 314 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 RANBP3Q9H6Z4 567 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 AKAP7Q9P0M2 348 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 HCN3Q9P1Z3 774 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 MGAT4CQ9UBM8 478 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SERGEFQ9UGK8 458 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 APOBEC3BQ9UH17 382 aaKnown RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 KLHL21Q9UJP4 597 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 POLHQ9Y253 713 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 BPTFQ12830 3046 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 A0A0A6YYD5 115 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 A0A0A6YYJ9 748 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 GXYLT2A0PJZ3 443 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 MEIS3P1A6NDR6 274 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 OTOL1A6NHN0 477 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 ELOA3DA6NLF2 546 aaPredicted RBP4.41□□□□□ -1.7
USP44-201ENST00000258499 FAM25EA8MYX2 175 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 ZNF879B4DU55 563 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 E9PI62 339 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 H0Y8X5 98 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SGK494L7N484 410 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 TNFRSF10AO00220 468 aa4.41□□□□□ -1.7
USP44-201ENST00000258499 SYT5O00445 386 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms