RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 OR52N1Q8NH53 320 aa23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 C1GALT1C1Q96EU7 318 aa23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 CMC2Q9NRP2 79 aa23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 LRIT1Q9P2V4 623 aa23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 TRAV27A0A087WT01 109 aa23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 GALNSP34059 522 aa23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 ACSM1Q08AH1 577 aa23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 SERTAD2Q14140 314 aa23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 ZNF791Q3KP31 576 aaPredicted RBP23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 MEPCEQ7L2J0 689 aaKnown RBP23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 ZFP41Q8N8Y5 198 aa23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 SLC25A46Q96AG3 418 aa23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 CEP19Q96LK0 163 aa23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 PELOQ9BRX2 385 aaKnown RBP23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 HCAR1Q9BXC0 346 aa23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 RNF215Q9Y6U7 377 aa23.21■■□□□ 1.31
TMEM55B-201ENST00000250489 FAM86C2PA6NEL3 165 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 HYAL3O43820 417 aaPredicted RBP23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 NGFRP08138 427 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 MSL3P1P0C860 447 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 TNFSF8P32971 234 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 KCNAB1Q14722 419 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 CRTC2Q53ET0 693 aaPredicted RBP23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 PRPF38BQ5VTL8 546 aaKnown RBP23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 LINC00114Q6XXX2 140 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 CMIPQ8IY22 773 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 OR51G2Q8NGK0 314 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 OR51A7Q8NH64 312 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 NACC2Q96BF6 587 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 KCTD7Q96MP8 289 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 TM9SF2Q99805 663 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 SLC30A2Q9BRI3 323 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 RERGLQ9H628 205 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 OR10H1Q9Y4A9 318 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 IQCMA0A1B0GVH7 501 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 TTC36A6NLP5 189 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 LOC110117498-PIK3R3F6TDL0 507 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 PIAS2O75928 621 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 CSNK1EP49674 416 aaKnown RBP23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 MXD1Q05195 221 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 CD200R1LQ6Q8B3 271 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 KIRREL2Q6UWL6 708 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 B3GLCTQ6Y288 498 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 SPRYD4Q8WW59 207 aaPredicted RBP23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 TPK1Q9H3S4 243 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 MAU2Q9Y6X3 613 aa23.2■■□□□ 1.3
TMEM55B-201ENST00000250489 ZC3H12DA2A288 527 aaKnown RBP23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 SYNDIG1LA6NDD5 238 aa23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 BOLA2-SMG1P6H3BVE0 249 aa23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 AKAP8O43823 692 aaKnown RBP23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 SNX4O95219 450 aa23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 CLEC2LP0C7M8 214 aa23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 TGM4P49221 684 aa23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 SEPHS1P49903 392 aa23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 FABP5Q01469 135 aa23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 RUNX1T1Q06455 604 aa23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 CADM2Q8N3J6 435 aa23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 KISS1RQ969F8 398 aaPredicted RBP23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 NEURL2Q9BR09 285 aa23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 MED18Q9BUE0 208 aa23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 SP140LQ9H930 580 aa23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 LANCL2Q9NS86 450 aa23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 CAB39Q9Y376 341 aaPredicted RBP23.19■■□□□ 1.3
TMEM55B-201ENST00000250489 SERINC4A6NH21 518 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 PAICSP22234 425 aaKnown RBP23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 FGF9P31371 208 aaPredicted RBP23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 NDUFAF6Q330K2 333 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 ULK3Q6PHR2 472 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 ZNF322Q6U7Q0 402 aaPredicted RBP23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 OR4C3Q8NH37 302 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 CUTCQ9NTM9 273 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 PRODH2Q9UF12 536 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 PCDH15Q96QU1 1955 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 PRR23D1E9PI22 279 aaPredicted RBP23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 H3BMH7 237 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 PRR23D2P0DMB1 279 aaPredicted RBP23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 CDC20Q12834 499 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 FHL1Q13642 323 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 ZNF362Q5T0B9 420 aaPredicted RBP23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 ARMC4Q5T2S8 1044 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 OAFQ86UD1 273 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 GATAD2AQ86YP4 633 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 ZSCAN1Q8NBB4 408 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 SLC37A3Q8NCC5 494 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 ASB15Q8WXK1 588 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 PTP4A1Q93096 173 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 TNFRSF13CQ96RJ3 184 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 SDHCQ99643 169 aaPredicted RBP23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 MCCC2Q9HCC0 563 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 RPS6KB2Q9UBS0 482 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 BAIAP2Q9UQB8 552 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 SLC35A3Q9Y2D2 325 aa23.18■■□□□ 1.3
TMEM55B-201ENST00000250489 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.17■■□□□ 1.3
TMEM55B-201ENST00000250489 TRDV1A0A1B0GX56 115 aa23.17■■□□□ 1.3
TMEM55B-201ENST00000250489 RGS5O15539 181 aa23.17■■□□□ 1.3
TMEM55B-201ENST00000250489 PPP1R3DO95685 299 aa23.17■■□□□ 1.3
TMEM55B-201ENST00000250489 CSTAP01040 98 aa23.17■■□□□ 1.3
TMEM55B-201ENST00000250489 ATXN8OSP0DMR3 200 aa23.17■■□□□ 1.3
TMEM55B-201ENST00000250489 BCKDHBP21953 392 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms