RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 PSMB10P40306 273 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 FOXK2Q01167 660 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 ERV3-1Q14264 604 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 GPR18Q14330 331 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 RTL10Q7L3V2 364 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 BEST4Q8NFU0 473 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 ZNF681Q96N22 645 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 THAP7Q9BT49 309 aaPredicted RBP11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 FN3KQ9H479 309 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 ACTR10Q9NZ32 417 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 DAPP1Q9UN19 280 aa11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 SIRT4Q9Y6E7 314 aaPredicted RBP11.71□□□□□ -0.54
RAB3IP-201ENST00000247833 ANKRD34BA5PLL1 514 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 AKR7A2O43488 359 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 SSNA1O43805 119 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 CTSEP14091 401 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 LIMK1P53667 647 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 ATP12AP54707 1039 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 MAB21L1Q13394 359 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 NTRK2Q16620 822 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 DUSP6Q16828 381 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 AMZ1Q400G9 498 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 ZNF628Q5EBL2 1059 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 ALG10BQ5I7T1 473 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 SMPDL3BQ92485 455 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 TRIM63Q969Q1 353 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 ORAI1Q96D31 301 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 ZNF559Q9BR84 538 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 TMEM74BQ9NUR3 256 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 GDE1Q9NZC3 331 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 HCN3Q9P1Z3 774 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 SF3B6Q9Y3B4 125 aaKnown RBP11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 AK6Q9Y3D8 172 aaKnown RBP11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 LRRK1Q38SD2 2015 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 SLC22A31A6NKX4 558 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 THY1P04216 161 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 DRD5P21918 477 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 ODF4Q2M2E3 257 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 ACSM3Q53FZ2 586 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 FBXO42Q6P3S6 717 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 VASH1Q7L8A9 365 aaPredicted RBP11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 LUZP2Q86TE4 346 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 TOMM5Q8N4H5 51 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 ZNF655Q8N720 491 aaPredicted RBP11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 ZNF784Q8NCA9 323 aaPredicted RBP11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 HMGB4Q8WW32 186 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 SERINC2Q96SA4 455 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 ZFYVE21Q9BQ24 234 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 RNF32Q9H0A6 362 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 CDHR4A6H8M9 788 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 NDUFB5O43674 189 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 SOX30O94993 753 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 SNRPBP14678 240 aaKnown RBP11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 ARSBP15848 533 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 ZNF267Q14586 743 aaPredicted RBP11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 NIPAL3Q6P499 406 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 CSNK1A1LQ8N752 337 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 POGLUT1Q8NBL1 392 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 DEDD2Q8WXF8 326 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 GSDMCQ9BYG8 508 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 KCMF1Q9P0J7 381 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 SLC17A4Q9Y2C5 497 aa11.7□□□□□ -0.54
RAB3IP-201ENST00000247833 SLC19A2O60779 497 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 EDNRAP25101 427 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 BCL2A1Q16548 175 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 NDUFAF6Q330K2 333 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 CEP78Q5JTW2 689 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 FAM205BPQ63HN1 556 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 PAQR7Q86WK9 346 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 OR52R1Q8NGF1 315 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 OR52N1Q8NH53 320 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 FAM3CQ92520 227 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 SNAPC3Q92966 411 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 UPRTQ96BW1 309 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 TEAD3Q99594 435 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 GPR174Q9BXC1 333 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 KIR3DX1Q9H7L2 352 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 CLDND1Q9NY35 253 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 NOTOA8MTQ0 251 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 BLOC1S5-TXNDC5H3BN57 136 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 EIF4EP06730 217 aaKnown RBP11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 HK1P19367 917 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 TBXA2RP21731 343 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 HTR2AP28223 471 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 FGF9P31371 208 aaPredicted RBP11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 SF3A2Q15428 464 aaKnown RBP11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 TMEM196Q5HYL7 178 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 BICRALQ6AI39 1079 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 WDR88Q6ZMY6 472 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 OR9A4Q8NGU2 314 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 AKAP1Q92667 903 aaKnown RBP eCLIP11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 GHSRQ92847 366 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 TMEM43Q9BTV4 400 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 PIGUQ9H490 435 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 IL21RQ9HBE5 538 aa11.69□□□□□ -0.54
RAB3IP-201ENST00000247833 SLC9B1P1A6NJY1 282 aa11.68□□□□□ -0.54
RAB3IP-201ENST00000247833 TOXO94900 526 aa11.68□□□□□ -0.54
RAB3IP-201ENST00000247833 PPP2R2DQ66LE6 453 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms