RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 GDPD1Q8N9F7 314 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 IL17RDQ8NFM7 739 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 OR6C4Q8NGE1 309 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 OR13C2Q8NGS9 318 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 TEAD3Q99594 435 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 IFT27Q9BW83 186 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 UBE2ZQ9H832 354 aaPredicted RBP14.93□□□□□ -0.02
UBE3D-201ENST00000237186 PRTFDC1Q9NRG1 225 aa14.93□□□□□ -0.02
UBE3D-201ENST00000237186 IGHV1OR15-9A0A0B4J2B8 117 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 PRR23D1E9PI22 279 aaPredicted RBP14.92□□□□□ -0.02
UBE3D-201ENST00000237186 GABRPO00591 440 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 CLDN4O14493 209 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 ADAM11O75078 769 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 PRR23D2P0DMB1 279 aaPredicted RBP14.92□□□□□ -0.02
UBE3D-201ENST00000237186 PEPDP12955 493 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 IL7P13232 177 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 NME1P15531 152 aaKnown RBP14.92□□□□□ -0.02
UBE3D-201ENST00000237186 CFL1P23528 166 aaKnown RBP14.92□□□□□ -0.02
UBE3D-201ENST00000237186 GALNSP34059 522 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 ATP12AP54707 1039 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 MAZP56270 477 aaKnown RBP14.92□□□□□ -0.02
UBE3D-201ENST00000237186 FUT7Q11130 342 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 SELENBP1Q13228 472 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 GALEQ14376 348 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 ZMAT1Q5H9K5 638 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 NPSR1Q6W5P4 371 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 C17orf82Q86X59 251 aaPredicted RBP14.92□□□□□ -0.02
UBE3D-201ENST00000237186 KLBQ86Z14 1044 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 ZNF687Q8N1G0 1237 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 ZFP41Q8N8Y5 198 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 OR4N2Q8NGD1 307 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 SLC2A12Q8TD20 617 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 PEX11GQ96HA9 241 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 MAP3K3Q99759 626 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 SOSTQ9BQB4 213 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 G6PC3Q9BUM1 346 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 HCAR1Q9BXC0 346 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.92□□□□□ -0.02
UBE3D-201ENST00000237186 RERGLQ9H628 205 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 SYNDIG1Q9H7V2 258 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 SERTAD3Q9UJW9 196 aa14.92□□□□□ -0.02
UBE3D-201ENST00000237186 CCDC182A6NF36 153 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 FABP12A6NFH5 140 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 ZNF749O43361 778 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 PRAMEF2O60811 474 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 PROS1P07225 676 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 SAGP10523 405 aaPredicted RBP14.91□□□□□ -0.02
UBE3D-201ENST00000237186 SLC2A5P22732 501 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 SSTR4P31391 388 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 CAPZA2P47755 286 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 BIKQ13323 160 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 FHL1Q13642 323 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 SLC35F1Q5T1Q4 408 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 ULK3Q6PHR2 472 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 ZC3H14Q6PJT7 736 aaKnown RBP14.91□□□□□ -0.02
UBE3D-201ENST00000237186 METAP1DQ6UB28 335 aaPredicted RBP14.91□□□□□ -0.02
UBE3D-201ENST00000237186 TMEM91Q6ZNR0 172 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 RCBTB1Q8NDN9 531 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 ATP6V1C2Q8NEY4 427 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 OR4C6Q8NH72 309 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 GRHL3Q8TE85 626 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 AHCYL2Q96HN2 611 aaKnown RBP14.91□□□□□ -0.02
UBE3D-201ENST00000237186 LRFN5Q96NI6 719 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 PHF7Q9BWX1 381 aaPredicted RBP14.91□□□□□ -0.02
UBE3D-201ENST00000237186 HDHD5Q9BXW7 423 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 Q9N2J8 555 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 C2orf42Q9NWW7 574 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 NPAP1Q9NZP6 1156 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 HCN3Q9P1Z3 774 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 GRIP1Q9Y3R0 1128 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 EFCAB7A8K855 629 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 HRKO00198 91 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 CASKO14936 926 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 WNT1P04628 370 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 CT45A8P0DMV1 189 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 CT45A9P0DMV2 189 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 PTBP1P26599 531 aaKnown RBP eCLIP14.91□□□□□ -0.021e-8■■■■■ 32.1
UBE3D-201ENST00000237186 HSD17B7P56937 341 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 PPP3R1P63098 170 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 CCDC85BQ15834 202 aaPredicted RBP14.91□□□□□ -0.02
UBE3D-201ENST00000237186 CT45A2Q5DJT8 189 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 ALG10BQ5I7T1 473 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 FAM131AQ6UXB0 335 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 OAFQ86UD1 273 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 GKN2Q86XP6 184 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 MARCH9Q86YJ5 346 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 TSTD1Q8NFU3 115 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 NEIL3Q8TAT5 605 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 NACC2Q96BF6 587 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 DIRAS2Q96HU8 199 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 DGAT2Q96PD7 388 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 DCLRE1CQ96SD1 692 aaKnown RBP14.91□□□□□ -0.02
UBE3D-201ENST00000237186 ALG8Q9BVK2 526 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 TMED9Q9BVK6 235 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 MED20Q9H944 212 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 ISG20L2Q9H9L3 353 aaKnown RBP14.91□□□□□ -0.02
UBE3D-201ENST00000237186 TBC1D17Q9HA65 648 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 SACM1LQ9NTJ5 587 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 PLCL2Q9UPR0 1127 aa14.91□□□□□ -0.02
UBE3D-201ENST00000237186 DTX4Q9Y2E6 619 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms