RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 CD226Q15762 336 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 CYP51A1Q16850 503 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 PDSS1Q5T2R2 415 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 C1orf185Q5T7R7 199 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 INTS11Q5TA45 600 aaKnown RBP10.21□□□□□ -0.77
SF3B6-201ENST00000233468 REP15Q6BDI9 236 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 REEP3Q6NUK4 255 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 XKRXQ6PP77 449 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 ARPINQ7Z6K5 226 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 MSRB3Q8IXL7 192 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 ULK2Q8IYT8 1036 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 GTPBP8Q8N3Z3 284 aaPredicted RBP10.21□□□□□ -0.77
SF3B6-201ENST00000233468 ANKS4BQ8N8V4 417 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 C11orf65Q8NCR3 313 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 BHLHE22Q8NFJ8 381 aaPredicted RBP10.21□□□□□ -0.77
SF3B6-201ENST00000233468 OR52P1PQ8NH57 321 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 ZPLD1Q8TCW7 415 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 RND1Q92730 232 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 LRRC58Q96CX6 371 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 ARSGQ96EG1 525 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 TMEM19Q96HH6 336 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 MRGPRX4Q96LA9 322 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 LRRC37BQ96QE4 947 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 ECSITQ9BQ95 431 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 CPPED1Q9BRF8 314 aaPredicted RBP10.21□□□□□ -0.77
SF3B6-201ENST00000233468 RTN4RQ9BZR6 473 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 PNPLA3Q9NST1 481 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 PAQR5Q9NXK6 330 aaPredicted RBP10.21□□□□□ -0.77
SF3B6-201ENST00000233468 ARMCX1Q9P291 453 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 GMPR2Q9P2T1 348 aaKnown RBP10.21□□□□□ -0.77
SF3B6-201ENST00000233468 ICAM5Q9UMF0 924 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 ANGPT4Q9Y264 503 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 VDAC3Q9Y277 283 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 L3MBTL1Q9Y468 752 aa10.21□□□□□ -0.77
SF3B6-201ENST00000233468 GTF3C1Q12789 2109 aa10.21□□□□□ -0.78
SF3B6-201ENST00000233468 OR2M5A3KFT3 312 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 PRAMEF27A3QJZ7 478 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 PRORSD1PA6NEY8 169 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 PRSS44E7EML9 344 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 ADAM10O14672 748 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 ARAFP10398 606 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 COX4I1P13073 169 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 NID1P14543 1247 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 FKBP2P26885 142 aaKnown RBP10.2□□□□□ -0.78
SF3B6-201ENST00000233468 ELK4P28324 431 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 PRDX6P30041 224 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 SCARB2Q14108 478 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 ARSKQ6UWY0 536 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 VASH1Q7L8A9 365 aaPredicted RBP10.2□□□□□ -0.78
SF3B6-201ENST00000233468 ZNF550Q7Z398 422 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 PIGWQ7Z7B1 504 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 SERPINA11Q86U17 422 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 LACC1Q8IV20 430 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 ZNF808Q8N4W9 903 aaPredicted RBP10.2□□□□□ -0.78
SF3B6-201ENST00000233468 HIPK4Q8NE63 616 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 ZNF563Q8TA94 476 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 GPR119Q8TDV5 335 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 ASB5Q8WWX0 329 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 ST8SIA1Q92185 356 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 WDYHV1Q96HA8 205 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 CCDC120Q96HB5 630 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 CCT8L2Q96SF2 557 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 HOPXQ9BPY8 73 aaPredicted RBP10.2□□□□□ -0.78
SF3B6-201ENST00000233468 CCDC106Q9BWC9 280 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 EVA1AQ9H8M9 152 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 CALHM2Q9HA72 323 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 SERINC1Q9NRX5 453 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 FAM53CQ9NYF3 392 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 SLC13A4Q9UKG4 626 aa10.2□□□□□ -0.78
SF3B6-201ENST00000233468 SPIN1Q9Y657 262 aaPredicted RBP10.2□□□□□ -0.78
SF3B6-201ENST00000233468 DSPPQ9NZW4 1301 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 H3BML4 177 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 FBP2O00757 339 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 HNRNPRO43390 633 aaKnown RBP10.19□□□□□ -0.78
SF3B6-201ENST00000233468 PGM3O95394 542 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 EPPINO95925 133 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 FAM107AO95990 144 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 C1QCP02747 245 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 LINGO3P0C6S8 592 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 ZNF708P17019 499 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 RPS4Y1P22090 263 aaKnown RBP10.19□□□□□ -0.78
SF3B6-201ENST00000233468 TCEA1P23193 301 aaKnown RBP10.19□□□□□ -0.78
SF3B6-201ENST00000233468 PGM1P36871 562 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 HTR3AP46098 478 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 LHX2P50458 406 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 MNAT1P51948 309 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 MTPNP58546 118 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 COPZ1P61923 177 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 RAC1P63000 192 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 EEF1A1P68104 462 aaKnown RBP10.19□□□□□ -0.78
SF3B6-201ENST00000233468 SRYQ05066 204 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 SKP2Q13309 424 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 MAPK14Q16539 360 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 PLPPR5Q32ZL2 321 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 EMC4Q5J8M3 183 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 ZNF311Q5JNZ3 666 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 RNF220Q5VTB9 566 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 EEF1A1P5Q5VTE0 462 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 NANOGP8Q6NSW7 305 aa10.19□□□□□ -0.78
SF3B6-201ENST00000233468 ERICH5Q6P6B1 374 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms