RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 TRAM2Q15035 370 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 KLHL26Q53HC5 615 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 TTC23Q5W5X9 447 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 PODNL1Q6PEZ8 512 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 UGT2A3Q6UWM9 527 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 USP51Q70EK9 711 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 GRAMD2AQ8IUY3 354 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 CMIPQ8IY22 773 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 ESX1Q8N693 406 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 EXD3Q8N9H8 876 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 AQP11Q8NBQ7 271 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 OR5L2Q8NGL0 311 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 OR8K3Q8NH51 312 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 NUBPLQ8TB37 319 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 OIT3Q8WWZ8 545 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 OMA1Q96E52 524 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 SLC41A3Q96GZ6 507 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 CCNL2Q96S94 520 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-221ENST00000641573 ADOQ96SZ5 270 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 POLR2J2Q9GZM3 115 aaKnown RBP12.04□□□□□ -0.48
PHGDH-221ENST00000641573 ZNF700Q9H0M5 742 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 POLR2J3Q9H1A7 115 aaKnown RBP12.04□□□□□ -0.48
PHGDH-221ENST00000641573 RIBC2Q9H4K1 309 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 DNAJB12Q9NXW2 375 aaKnown RBP12.04□□□□□ -0.48
PHGDH-221ENST00000641573 KIF26BQ2KJY2 2108 aa12.04□□□□□ -0.48
PHGDH-221ENST00000641573 IGHV1-45A0A0A0MS14 117 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 SH3PXD2BA1X283 911 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 SCDO00767 359 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 OR10H3O60404 316 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 FMO6PO60774 539 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 ZFAND5O76080 213 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 CLIC3O95833 236 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 SFTPCP11686 197 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 COX6A1P12074 109 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 TBXA2RP21731 343 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 ABCD3P28288 659 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 POLR2IP36954 125 aaKnown RBP12.03□□□□□ -0.48
PHGDH-221ENST00000641573 PNLIPRP2P54317 469 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 NRG3P56975 720 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 OR1Q1Q15612 314 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 ZNF770Q6IQ21 691 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-221ENST00000641573 C16orf47Q6ZP98 133 aaPredicted RBP12.03□□□□□ -0.48
PHGDH-221ENST00000641573 ZNF550Q7Z398 422 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 GDF7Q7Z4P5 450 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 LINC00471Q8N535 108 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 ZNF527Q8NB42 609 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 SLC7A13Q8TCU3 470 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 ADAMTS16Q8TE57 1224 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 SLC38A4Q969I6 547 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 SLC35B4Q969S0 331 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 NIPSNAP1Q9BPW8 284 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 ZNF559Q9BR84 538 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 ANKRD19PQ9H560 264 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 ZNF556Q9HAH1 456 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 PAPOLBQ9NRJ5 636 aaKnown RBP12.03□□□□□ -0.48
PHGDH-221ENST00000641573 TESQ9UGI8 421 aaKnown RBP12.03□□□□□ -0.48
PHGDH-221ENST00000641573 TCFL5Q9UL49 500 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 MGAT4BQ9UQ53 548 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 FARSAQ9Y285 508 aaKnown RBP12.03□□□□□ -0.48
PHGDH-221ENST00000641573 SLC35A3Q9Y2D2 325 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 POFUT2Q9Y2G5 429 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 PCDHGB5Q9Y5G0 923 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 HS3ST3B1Q9Y662 390 aa12.03□□□□□ -0.48
PHGDH-221ENST00000641573 AHCTF1Q8WYP5 2266 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 LOC100130705A0A1B0GUX0 176 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 TRAPPC13A5PLN9 417 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 MAGEA13PA6NCF6 341 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 TMEM200CA6NKL6 621 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 SOCS6O14544 535 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 SLC16A6O15403 523 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 ICOSLGO75144 302 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 UGT2B11O75310 529 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 CSTAP01040 98 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 GASTP01350 101 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 THY1P04216 161 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 LYNP07948 512 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 HPGDP15428 266 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 MMP11P24347 488 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 ADH7P40394 386 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 ACAA2P42765 397 aaKnown RBP12.02□□□□□ -0.49
PHGDH-221ENST00000641573 CHN2P52757 468 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 UGT2B15P54855 530 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 RPS18P62269 152 aaKnown RBP12.02□□□□□ -0.49
PHGDH-221ENST00000641573 RPS15P62841 145 aaKnown RBP12.02□□□□□ -0.49
PHGDH-221ENST00000641573 BTBD16Q32M84 506 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 NDUFAF6Q330K2 333 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 FNDC7Q5VTL7 733 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 DESI1Q6ICB0 168 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 KRT80Q6KB66 452 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 PGBD2Q6P3X8 592 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 OR4K5Q8NGD3 323 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 ELP5Q8TE02 316 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 THAP3Q8WTV1 239 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-221ENST00000641573 GTPBP3Q969Y2 492 aaKnown RBP12.02□□□□□ -0.49
PHGDH-221ENST00000641573 IMMP1LQ96LU5 166 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 GABARAPL3Q9BY60 117 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 DEFB126Q9BYW3 111 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 TRIM2Q9C040 744 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 B3GNT4Q9C0J1 378 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 TMEM27Q9HBJ8 222 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms