RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 SLC35B4Q969S0 331 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 ZNF559Q9BR84 538 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 LAT2Q9GZY6 243 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 MAGIXQ9H6Y5 334 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 ZFP64Q9NPA5 681 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 OLAHQ9NV23 265 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 PCDHGB6Q9Y5F9 930 aa11.84□□□□□ -0.51
PHGDH-218ENST00000641491 SPIN1Q9Y657 262 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-218ENST00000641491 A0A087WZY1 265 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 CDHR4A6H8M9 788 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 C2orf72A6NCS6 295 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 NPIPB9F8W1W9 429 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 SNPHO15079 494 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 CDC40O60508 579 aaKnown RBP eCLIP11.83□□□□□ -0.52
PHGDH-218ENST00000641491 CBR3O75828 277 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 PRKD3O94806 890 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 SORBS2O94875 1100 aaKnown RBP11.83□□□□□ -0.52
PHGDH-218ENST00000641491 CRYABP02511 175 aaKnown RBP11.83□□□□□ -0.52
PHGDH-218ENST00000641491 FCGR1AP12314 374 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 ZNF24P17028 368 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 EEF1A1P68104 462 aaKnown RBP11.83□□□□□ -0.52
PHGDH-218ENST00000641491 ZNF117Q03924 483 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 KPNB1Q14974 876 aaKnown RBP11.83□□□□□ -0.52
PHGDH-218ENST00000641491 MAPK11Q15759 364 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.83□□□□□ -0.525e-8■■■□□ 19.2
PHGDH-218ENST00000641491 RAET1LQ5VY80 246 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 DESI1Q6ICB0 168 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 ZFP1Q6P2D0 407 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 PCSK4Q6UW60 755 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-218ENST00000641491 LURAP1LQ8IV03 231 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 SULF2Q8IWU5 870 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 CATSPER1Q8NEC5 780 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 OR2M7Q8NG81 312 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 OR5W2Q8NH69 310 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 OR14L1PQ8NHC6 308 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 TRIM2Q9C040 744 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 SLC25A18Q9H1K4 315 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 DSN1Q9H410 356 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 LDAHQ9H6V9 325 aa11.83□□□□□ -0.52
PHGDH-218ENST00000641491 KRCC1Q9NPI7 259 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-218ENST00000641491 DNAJB12Q9NXW2 375 aaKnown RBP11.83□□□□□ -0.52
PHGDH-218ENST00000641491 ANKUB1A6NFN9 424 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 ANKRD65E5RJM6 399 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 M0R3H8 397 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 LGI1O95970 557 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 GKN3PP0CG01 181 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 RAP2AP10114 183 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 HK1P19367 917 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 EIF1P41567 113 aaKnown RBP11.82□□□□□ -0.52
PHGDH-218ENST00000641491 HTR3AP46098 478 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 ERFP50548 548 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 DSCR4P56555 118 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-218ENST00000641491 SMIM11AP58511 58 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 MS4A2Q01362 244 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 ALDH6A1Q02252 535 aaKnown RBP11.82□□□□□ -0.52
PHGDH-218ENST00000641491 CD226Q15762 336 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 FXNQ16595 210 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 DUSP7Q16829 419 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 TIGD3Q6B0B8 471 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 ENPP6Q6UWR7 440 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 VTCN1Q7Z7D3 282 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 GRAMD2AQ8IUY3 354 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 CNOT9Q92600 299 aaKnown RBP11.82□□□□□ -0.52
PHGDH-218ENST00000641491 PNPLA2Q96AD5 504 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 ZG16BQ96DA0 208 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 SCMH1Q96GD3 660 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 ZNF347Q96SE7 839 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 MCHR1Q99705 422 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 FNDC11Q9BVV2 318 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 POLR2J2Q9GZM3 115 aaKnown RBP11.82□□□□□ -0.52
PHGDH-218ENST00000641491 POLR2J3Q9H1A7 115 aaKnown RBP11.82□□□□□ -0.52
PHGDH-218ENST00000641491 SH2D2AQ9NP31 389 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 SERINC1Q9NRX5 453 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 RLIMQ9NVW2 624 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 TUBA8Q9NY65 449 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-218ENST00000641491 TAS2R10Q9NYW0 307 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 MED11Q9P086 117 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 PRDM4Q9UKN5 801 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 VDAC3Q9Y277 283 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 C15orf41Q9Y2V0 281 aa11.82□□□□□ -0.52
PHGDH-218ENST00000641491 CENPVL1A0A0U1RR11 272 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 CLDN24A6NM45 220 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 FAM166BA8MTA8 275 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 ACOT8O14734 319 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 FRS3O43559 492 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 TCEA1P23193 301 aaKnown RBP11.81□□□□□ -0.52
PHGDH-218ENST00000641491 DPP4P27487 766 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 OR1E2P47887 323 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 IDH2P48735 452 aaKnown RBP11.81□□□□□ -0.52
PHGDH-218ENST00000641491 ARHGDIAP52565 204 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 ACTR3P61158 418 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 PPIAP62937 165 aaKnown RBP11.81□□□□□ -0.52
PHGDH-218ENST00000641491 SPIBQ01892 262 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 KLRB1Q12918 225 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 EPS8Q12929 822 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 SKP2Q13309 424 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 NDUFAF6Q330K2 333 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 WBP2NLQ6ICG8 309 aa11.81□□□□□ -0.52
PHGDH-218ENST00000641491 AAGABQ6PD74 315 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms