RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 HOXD4P09016 255 aaPredicted RBP19.65■□□□□ 0.74
SCN1B-206ENST00000638536 POU3F2P20265 443 aaPredicted RBP19.65■□□□□ 0.74
SCN1B-206ENST00000638536 ANXA11P50995 505 aaKnown RBP19.65■□□□□ 0.74
SCN1B-206ENST00000638536 NSUN5P2Q63ZY6 315 aa19.65■□□□□ 0.74
SCN1B-206ENST00000638536 ZPLD1Q8TCW7 415 aa19.65■□□□□ 0.74
SCN1B-206ENST00000638536 SMPDL3BQ92485 455 aa19.65■□□□□ 0.74
SCN1B-206ENST00000638536 P2RX2Q9UBL9 471 aa19.65■□□□□ 0.74
SCN1B-206ENST00000638536 LEF1Q9UJU2 399 aaPredicted RBP19.65■□□□□ 0.74
SCN1B-206ENST00000638536 NDUFAF1Q9Y375 327 aa19.65■□□□□ 0.74
SCN1B-206ENST00000638536 ITPR2Q14571 2701 aa19.64■□□□□ 0.74
SCN1B-206ENST00000638536 CLCA1A8K7I4 914 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 PRSS44E7EML9 344 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 SEC14L5O43304 696 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 NUDT14O95848 222 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 SNRPB2P08579 225 aaKnown RBP19.64■□□□□ 0.73
SCN1B-206ENST00000638536 PTGER4P35408 488 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 ZNF41P51814 821 aaPredicted RBP19.64■□□□□ 0.73
SCN1B-206ENST00000638536 TXNL4AP83876 142 aaKnown RBP19.64■□□□□ 0.73
SCN1B-206ENST00000638536 HPCAP84074 193 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 FOXF1Q12946 379 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 KLF10Q13118 480 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 ART3Q13508 389 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 GTPBP8Q8N3Z3 284 aaPredicted RBP19.64■□□□□ 0.73
SCN1B-206ENST00000638536 TMCO5AQ8N6Q1 288 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 C9orf106Q8NAJ2 232 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 TMEM19Q96HH6 336 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 THUMPD3Q9BV44 507 aaKnown RBP19.64■□□□□ 0.73
SCN1B-206ENST00000638536 RSPO3Q9BXY4 272 aaPredicted RBP19.64■□□□□ 0.73
SCN1B-206ENST00000638536 LAT2Q9GZY6 243 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 COQ3Q9NZJ6 369 aa19.64■□□□□ 0.73
SCN1B-206ENST00000638536 A0A087WZY1 265 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 NKX2-6A6NCS4 301 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 AGAP5A6NIR3 686 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 EIF4E2O60573 245 aaKnown RBP19.63■□□□□ 0.73
SCN1B-206ENST00000638536 BMP2P12643 396 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 PEPDP12955 493 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 RPS4Y1P22090 263 aaKnown RBP19.63■□□□□ 0.73
SCN1B-206ENST00000638536 HTR1EP28566 365 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 CCR4P51679 360 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 KCNJ10P78508 379 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 SELPLGQ14242 412 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 BCL2A1Q16548 175 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 GGNQ86UU5 652 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 DPP10Q8N608 796 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 FAM71CQ8NEG0 241 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 OR5W2Q8NH69 310 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 CA5BP1Q8WTZ4 195 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 CNOT9Q92600 299 aaKnown RBP19.63■□□□□ 0.73
SCN1B-206ENST00000638536 TMEM185BQ9H7F4 350 aa19.63■□□□□ 0.73
SCN1B-206ENST00000638536 CD8B2A6NJW9 211 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 FAM90A27PA6NNH2 459 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 TGM6O95932 706 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 PRKCAP17252 672 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 SHC1P29353 583 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 CHRNB4P30926 498 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 CEACAM8P31997 349 aaPredicted RBP19.62■□□□□ 0.73
SCN1B-206ENST00000638536 MAGEA8P43361 318 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 RUNDC3AQ59EK9 446 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 RIPPLY2Q5TAB7 128 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 POMZP3Q6PJE2 187 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 EIF3MQ7L2H7 374 aaKnown RBP19.62■□□□□ 0.73
SCN1B-206ENST00000638536 DHDDSQ86SQ9 333 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 VRK2Q86Y07 508 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 LACC1Q8IV20 430 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 FBXO27Q8NI29 283 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 ZBTB8AQ96BR9 441 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 ZNF845Q96IR2 970 aaPredicted RBP19.62■□□□□ 0.73
SCN1B-206ENST00000638536 TREX2Q9BQ50 279 aaPredicted RBP19.62■□□□□ 0.73
SCN1B-206ENST00000638536 CPPED1Q9BRF8 314 aaPredicted RBP19.62■□□□□ 0.73
SCN1B-206ENST00000638536 MTHFD2LQ9H903 347 aaPredicted RBP19.62■□□□□ 0.73
SCN1B-206ENST00000638536 ARMCX1Q9P291 453 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.62■□□□□ 0.73
SCN1B-206ENST00000638536 GMEB1Q9Y692 573 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 DSPPQ9NZW4 1301 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 C7orf72A4D263 438 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 MBD3L4A6NDZ8 208 aaPredicted RBP19.62■□□□□ 0.73
SCN1B-206ENST00000638536 MBD3L3A6NE82 208 aaPredicted RBP19.62■□□□□ 0.73
SCN1B-206ENST00000638536 MBD3L5A6NJ08 208 aaPredicted RBP19.62■□□□□ 0.73
SCN1B-206ENST00000638536 ANGPT2O15123 496 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 DNAJA2O60884 412 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 ZNF17P17021 662 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 AGFG1P52594 562 aaKnown RBP19.62■□□□□ 0.73
SCN1B-206ENST00000638536 ZNF136P52737 540 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 FADDQ13158 208 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 ZNF787Q6DD87 383 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 LILRB4Q8NHJ6 448 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 MBD3L2Q8NHZ7 208 aaPredicted RBP19.62■□□□□ 0.73
SCN1B-206ENST00000638536 TSPEARQ8WU66 669 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 ELAC2Q9BQ52 826 aaKnown RBP19.62■□□□□ 0.73
SCN1B-206ENST00000638536 CALHM2Q9HA72 323 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 HHATLQ9HCP6 504 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 RLIMQ9NVW2 624 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 CLCF1Q9UBD9 225 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 CHST2Q9Y4C5 530 aa19.62■□□□□ 0.73
SCN1B-206ENST00000638536 MPDZO75970 2070 aa19.61■□□□□ 0.73
SCN1B-206ENST00000638536 GPX2P18283 190 aa19.61■□□□□ 0.73
SCN1B-206ENST00000638536 TIMP3P35625 211 aa19.61■□□□□ 0.73
SCN1B-206ENST00000638536 SUMO3P55854 103 aaPredicted RBP19.61■□□□□ 0.73
SCN1B-206ENST00000638536 FOXF2Q12947 444 aa19.61■□□□□ 0.73
SCN1B-206ENST00000638536 CAPRIN1Q14444 709 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms