RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 MAPK14Q16539 360 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 SLC9B1Q4ZJI4 515 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 SAXO2Q658L1 398 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 MTERF4Q7Z6M4 381 aaKnown RBP15.88■□□□□ 0.13
PNKP-230ENST00000638016 TMCO5AQ8N6Q1 288 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 ZNF610Q8N9Z0 462 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 ZNF527Q8NB42 609 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 ATP6V1C2Q8NEY4 427 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 OR2V1Q8NHB1 315 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 ROBO4Q8WZ75 1007 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 SLC35A5Q9BS91 424 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 ZNF350Q9GZX5 532 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 KLHL28Q9NXS3 571 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 GPR45Q9Y5Y3 372 aa15.88■□□□□ 0.13
PNKP-230ENST00000638016 FREM1Q5H8C1 2179 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 GTPBP1O00178 669 aaKnown RBP15.87■□□□□ 0.13
PNKP-230ENST00000638016 ADAMDEC1O15204 470 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 HDAC3O15379 428 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 SIAH2O43255 324 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 ERLIN1O75477 346 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 UGT2B17O75795 530 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 CYP7B1O75881 506 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 GSNP06396 782 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 CRHP06850 196 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 PRKCAP17252 672 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 UQCRC2P22695 453 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 S100A3P33764 101 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 PLAURQ03405 335 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 ARHGAP11BQ3KRB8 267 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 FBXW10Q5XX13 1052 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 HBMQ6B0K9 141 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 HEPHL1Q6MZM0 1159 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 BHLHB9Q6PI77 547 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 C22orf34Q6ZV56 151 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 ZNF550Q7Z398 422 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 C16orf62Q7Z3J2 963 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 LILRA2Q8N149 483 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 GPR119Q8TDV5 335 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 XAGE5Q8WWM1 108 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 KLHL15Q96M94 604 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 PRRG4Q9BZD6 226 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 HOXD1Q9GZZ0 328 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 QRSL1Q9H0R6 528 aaKnown RBP15.87■□□□□ 0.13
PNKP-230ENST00000638016 MANSC1Q9H8J5 431 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 COQ10BQ9H8M1 238 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 C6orf203Q9P0P8 240 aaPredicted RBP15.87■□□□□ 0.13
PNKP-230ENST00000638016 ST6GALNAC2Q9UJ37 374 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 PCDHGB4Q9UN71 923 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 TESMINQ9Y4I5 508 aa15.87■□□□□ 0.13
PNKP-230ENST00000638016 SERINC4A6NH21 518 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 CLDN24A6NM45 220 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 HRGP04196 525 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 UBL4AP11441 157 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 KLK2P20151 261 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 CD79BP40259 229 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 CLNS1AP54105 237 aaKnown RBP15.86■□□□□ 0.13
PNKP-230ENST00000638016 SKP2Q13309 424 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 QPRTQ15274 297 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 ZNF141Q15928 474 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 EXOC3L2Q2M3D2 409 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 ANXA8L1Q5VT79 327 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 ANKRD34AQ69YU3 496 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 NXNQ6DKJ4 435 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 TYW3Q6IPR3 259 aaKnown RBP15.86■□□□□ 0.13
PNKP-230ENST00000638016 DNAJC14Q6Y2X3 702 aaPredicted RBP15.86■□□□□ 0.13
PNKP-230ENST00000638016 ESPNLQ6ZVH7 1005 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 FAM214BQ7L5A3 538 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 RNF130Q86XS8 419 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 LRRC34Q8IZ02 419 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 PNPT1Q8TCS8 783 aaKnown RBP15.86■□□□□ 0.13
PNKP-230ENST00000638016 MIPOL1Q8TD10 442 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 ABHD3Q8WU67 409 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 OSTF1Q92882 214 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 ZG16BQ96DA0 208 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 CCDC115Q96NT0 180 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 DACH2Q96NX9 599 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 WFIKKN1Q96NZ8 548 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 OR52B2Q96RD2 323 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 NMUR2Q9GZQ4 415 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 SLC6A13Q9NSD5 602 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 NKIRAS1Q9NYS0 192 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 PROCRQ9UNN8 238 aa15.86■□□□□ 0.13
PNKP-230ENST00000638016 ZNF469Q96JG9 3925 aaPredicted RBP15.86■□□□□ 0.13
PNKP-230ENST00000638016 A0A1W2PNR3 127 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 H3BNH8 94 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 ZNF195O14628 629 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 ZNF264O43296 627 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 KIAA0513O60268 411 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 STX11O75558 287 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 NTN1O95631 604 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 UBTFL6P0CB48 400 aaPredicted RBP15.85■□□□□ 0.13
PNKP-230ENST00000638016 NID1P14543 1247 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 POU2F1P14859 743 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 ME2P23368 584 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 CHI3L1P36222 383 aaPredicted RBP15.85■□□□□ 0.13
PNKP-230ENST00000638016 KCNJ5P48544 419 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 SUMO3P55854 103 aaPredicted RBP15.85■□□□□ 0.13
PNKP-230ENST00000638016 COX20Q5RI15 118 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 FRRS1Q6ZNA5 592 aa15.85■□□□□ 0.13
PNKP-230ENST00000638016 SPATA19Q7Z5L4 167 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms