RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 TOR1AIP2Q8NFQ8 470 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 OR10D3Q8NH80 312 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 POC1BQ8TC44 478 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 MIPOL1Q8TD10 442 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 RAB8BQ92930 207 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 NEURL3Q96EH8 262 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 TEX37Q96LM6 180 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 CCDC115Q96NT0 180 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 NPAS1Q99742 590 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 GPATCH1Q9BRR8 931 aaKnown RBP12.41□□□□□ -0.42
PNKP-228ENST00000637325 RNF122Q9H9V4 155 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 GALNT8Q9NY28 637 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 MKLN1Q9UL63 735 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 MCTS1Q9ULC4 181 aaKnown RBP12.41□□□□□ -0.42
PNKP-228ENST00000637325 GPC6Q9Y625 555 aaPredicted RBP12.41□□□□□ -0.42
PNKP-228ENST00000637325 CSMD2Q7Z408 3487 aa12.41□□□□□ -0.42
PNKP-228ENST00000637325 SERINC4A6NH21 518 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 GJE1A6NN92 205 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 A6NNC1 897 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 A8MXE2 369 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 NPIPB9F8W1W9 429 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 KLF11O14901 512 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 UBDO15205 165 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 CXCL13O43927 109 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 FCMRO60667 390 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 DIAPH2O60879 1101 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 CTAG2O75638 210 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 SLC22A3O75751 556 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 LINGO3P0C6S8 592 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 IL12AP29459 219 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 SFTPDP35247 375 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 KIR2DL2P43627 348 aaPredicted RBP12.4□□□□□ -0.42
PNKP-228ENST00000637325 CTBP2P56545 445 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 FOXF1Q12946 379 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 CBFBQ13951 182 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 GSTA3Q16772 222 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 SLC9B1Q4ZJI4 515 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 PDCD4Q53EL6 469 aaKnown RBP12.4□□□□□ -0.42
PNKP-228ENST00000637325 GPAT3Q53EU6 434 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 HBMQ6B0K9 141 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 OLIG3Q7RTU3 272 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 BTLAQ7Z6A9 289 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 ATP6V1C2Q8NEY4 427 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 OR5W2Q8NH69 310 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 OR2V1Q8NHB1 315 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 FBXO27Q8NI29 283 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 GPR119Q8TDV5 335 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 LRRC8CQ8TDW0 803 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 DYDC1Q8WWB3 177 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 ROPN1LQ96C74 230 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 STARD4Q96DR4 205 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 MARK4Q96L34 752 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 ATP6V1G3Q96LB4 118 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 KLHDC3Q9BQ90 382 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 SLC39A3Q9BRY0 314 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 INPP5KQ9BT40 448 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 LAT2Q9GZY6 243 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 TIGARQ9NQ88 270 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 ARGLU1Q9NWB6 273 aaPredicted RBP12.4□□□□□ -0.42
PNKP-228ENST00000637325 NDRG3Q9UGV2 375 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 ICAM5Q9UMF0 924 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 PROCRQ9UNN8 238 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 WDR45Q9Y484 360 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 AKAP9Q99996 3911 aa12.4□□□□□ -0.42
PNKP-228ENST00000637325 F8P00451 2351 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 A0A0J9YW62 118 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 RFXANKO14593 260 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 ZNF195O14628 629 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 CASKO14936 926 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 ADAMDEC1O15204 470 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 AQP8O94778 261 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 CSTAP01040 98 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 IL6P05231 212 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 GSNP06396 782 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 PSMA4P25789 261 aaKnown RBP12.39□□□□□ -0.43
PNKP-228ENST00000637325 ELK4P28324 431 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 ADH6P28332 368 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 KCNJ5P48544 419 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 CARD18P57730 90 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 DAZAP2Q15038 168 aaPredicted RBP12.39□□□□□ -0.43
PNKP-228ENST00000637325 ZNF141Q15928 474 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 GTF2IRD2BQ6EKJ0 949 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 HEPHL1Q6MZM0 1159 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 EIF3MQ7L2H7 374 aaKnown RBP12.39□□□□□ -0.43
PNKP-228ENST00000637325 HDXQ7Z353 690 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 GTF2IRD2Q86UP8 949 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 RNF130Q86XS8 419 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 OSTF1Q92882 214 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 REXO5Q96IC2 774 aaKnown RBP12.39□□□□□ -0.43
PNKP-228ENST00000637325 MAELQ96JY0 434 aaKnown RBP12.39□□□□□ -0.43
PNKP-228ENST00000637325 KLHL15Q96M94 604 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 THUMPD3Q9BV44 507 aaKnown RBP12.39□□□□□ -0.43
PNKP-228ENST00000637325 ZNF350Q9GZX5 532 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 OPN3Q9H1Y3 402 aaPredicted RBP12.39□□□□□ -0.43
PNKP-228ENST00000637325 CLEC4MQ9H2X3 399 aaPredicted RBP12.39□□□□□ -0.43
PNKP-228ENST00000637325 POLE3Q9NRF9 147 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 RASSF1Q9NS23 344 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 EMC9Q9Y3B6 208 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 USH1CQ9Y6N9 552 aa12.39□□□□□ -0.43
PNKP-228ENST00000637325 PRR14LQ5THK1 2151 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms