RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 DIDO1Q9BTC0 2240 aaKnown RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 FRYQ5TBA9 3013 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 PIEZO1Q92508 2521 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 MYO18BQ8IUG5 2567 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 WDR87Q6ZQQ6 2873 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ZFHX3Q15911 3703 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 NCOA6Q14686 2063 aaPredicted RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 GCN1Q92616 2671 aaKnown RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 MACROD2A1Z1Q3 448 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SRRM4A7MD48 611 aaKnown RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 E7ENQ6 273 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SLC28A1O00337 649 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 PDXKO00764 312 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CHEK1O14757 476 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SLC7A4O43246 635 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 MBTPS2O43462 519 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TSPAN2O60636 221 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CSDE1O75534 798 aaKnown RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 PLEKHA8P1O95397 391 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ANP32DO95626 131 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TXNDC12O95881 172 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ECDO95905 644 aaPredicted RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 FCER2P06734 321 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 PROS1P07225 676 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CCDC159P0C7I6 412 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CT45A8P0DMV1 189 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CT45A9P0DMV2 189 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 GNSP15586 552 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF19P17023 458 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ACP1P24666 158 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 U2AF2P26368 475 aaKnown RBP eCLIP0.81□□□□□ -2.283e-8■□□□□ 9.3
SMARCB1-209ENST00000635578 PTBP1P26599 531 aaKnown RBP eCLIP0.81□□□□□ -2.282e-9■■■■■ 39.5
SMARCB1-209ENST00000635578 TMOD1P28289 359 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SAA4P35542 130 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ACVR1BP36896 505 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 RBMXP38159 391 aaKnown RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 XCR1P46094 333 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TDO2P48775 406 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 NUMBP49757 651 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TKTL1P51854 596 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 METAP1P53582 386 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 NLRP11P59045 1033 aaKnown RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 FKBP1AP62942 108 aaKnown RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 NTHL1P78549 312 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CXCL6P80162 114 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ARF5P84085 180 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SRYQ05066 204 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 BCL2L1Q07817 233 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 MFGE8Q08431 387 aaPredicted RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 GTF3C1Q12789 2109 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ASAH1Q13510 395 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 EIF2B1Q14232 305 aaKnown RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 GK2Q14410 553 aaPredicted RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 MEF2DQ14814 521 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 GPNMBQ14956 572 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 STXBP2Q15833 593 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CDC37Q16543 378 aaPredicted RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CLPPQ16740 277 aaPredicted RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 UBE2SQ16763 222 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TYSND1Q2T9J0 566 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 HKDC1Q2TB90 917 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 AARDQ4LEZ3 155 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SLC39A12Q504Y0 691 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CAVIN4Q5BKX8 364 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CT45A2Q5DJT8 189 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 PAGE2BQ5JRK9 111 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM31Q5JXX7 168 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 LINC00242Q5T6M2 205 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SEL1L2Q5TEA6 688 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TAF3Q5VWG9 929 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SLX4IPQ5VYV7 408 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 MFSD14CQ5VZR4 134 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 WDR25Q64LD2 544 aaPredicted RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 MFSD7Q6UXD7 560 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CCBE1Q6UXH8 406 aaPredicted RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TIFABQ6ZNK6 161 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 STOX1Q6ZVD7 989 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 GET4Q7L5D6 327 aaPredicted RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 P4HA3Q7Z4N8 544 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ITIH5Q86UX2 942 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 GPBP1Q86WP2 473 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CDR2LQ86X02 465 aaPredicted RBP0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SIAH3Q8IW03 269 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 C11orf42Q8N5U0 333 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF525Q8N782 197 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF491Q8N8L2 437 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 NAT8LQ8N9F0 302 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SPC24Q8NBT2 197 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CCNYQ8ND76 341 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 CCDC26Q8TAB7 109 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 FIBINQ8TAL6 211 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 MRAPQ8TCY5 172 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ANKRD49Q8WVL7 239 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM37Q8WXS4 190 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 ING5Q8WYH8 240 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 PHYHIPQ92561 330 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 LHX4Q969G2 390 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 SNX21Q969T3 373 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 PNPLA2Q96AD5 504 aa0.81□□□□□ -2.28
SMARCB1-209ENST00000635578 RAB39BQ96DA2 213 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms