RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 WDR54Q9H977 334 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 CTPS2Q9NRF8 586 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 KRT84Q9NSB2 600 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 FLRT3Q9NZU0 649 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 C19orf25Q9UFG5 118 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 TMCC3Q9ULS5 477 aa8.74□□□□□ -1.01
PDLIM5-223ENST00000627587 C2orf92A0A1B0GVN3 265 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 A0A1W2PRQ8 180 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 ARRDC5A6NEK1 342 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 FRG2CA6NGY1 282 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 KLF7O75840 302 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 CBLP22681 906 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 PSMD4P55036 377 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 TAS2R41P59536 307 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 FOXD4Q12950 439 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 DGCR6Q14129 220 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 DECR1Q16698 335 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 DCST1Q5T197 706 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 PDZK1Q5T2W1 519 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 DESI1Q6ICB0 168 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF614Q8N883 585 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF441Q8N8Z8 693 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 OR4C3Q8NH37 302 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 MR1Q95460 341 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 LCORQ96JN0 433 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 MUS81Q96NY9 551 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 GAL3ST4Q96RP7 486 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 GRIP2Q9C0E4 1043 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF556Q9HAH1 456 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 MRTO4Q9UKD2 239 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 PPIEQ9UNP9 301 aaKnown RBP8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 POLHQ9Y253 713 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 PCDHGA10Q9Y5H3 936 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 CPAMD8Q8IZJ3 1885 aa8.73□□□□□ -1.01
PDLIM5-223ENST00000627587 SAGE2PA6NJ88 616 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 FAAHO00519 579 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 SLC16A6O15403 523 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 OXSR1O95747 527 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 GKN3PP0CG01 181 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 ITGAMP11215 1152 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 DRD5P21918 477 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 HTR2AP28223 471 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 CLK3P49761 638 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 ATP12AP54707 1039 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 BLMHQ13867 455 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF141Q15928 474 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 LAIR2Q6ISS4 152 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 TMEM205Q6UW68 189 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 RANBP3LQ86VV4 465 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 LURAP1LQ8IV03 231 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 CCDC71Q8IV32 467 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 B3GNT7Q8NFL0 401 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 PSMG3-AS1Q96PY0 264 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 LPAR4Q99677 370 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 EVA1AQ9H8M9 152 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 PNPLA3Q9NST1 481 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 KCNMB2Q9Y691 235 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 FLNCQ14315 2725 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 DOPEY2Q9Y3R5 2298 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 BOD1L1Q8NFC6 3051 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 MPDZO75970 2070 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 LOC100130705A0A1B0GUX0 176 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 SH3PXD2BA1X283 911 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 CDC14CA4D256 554 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 TMEM200CA6NKL6 621 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 CPSF4LA6NMK7 179 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 ZNF354AO60765 605 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 UGT2B11O75310 529 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 LYPD3O95274 346 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 TNFAIP8O95379 198 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 IL33O95760 270 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 GASTP01350 101 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 UMODP07911 640 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 SMIM18P0DKX4 95 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 DLSTP36957 453 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 TPD52P55327 224 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 ST3GAL3Q11203 375 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 ZSWIM7Q19AV6 140 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 C4orf17Q53FE4 359 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 ENTPD8Q5MY95 495 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 FNDC7Q5VTL7 733 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 PODNL1Q6PEZ8 512 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 PAPD4Q6PIY7 484 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 APOOLQ6UXV4 268 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 PLEKHM3Q6ZWE6 761 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 CPEB2Q7Z5Q1 589 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 LINC00471Q8N535 108 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 GALNT6Q8NCL4 622 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 ADAMTS16Q8TE57 1224 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 OIT3Q8WWZ8 545 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 CNOT9Q92600 299 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 EFHD2Q96C19 240 aaPredicted RBP8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 C8orf44Q96CB5 159 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 MCHR1Q99705 422 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 GABARAPL3Q9BY60 117 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 WWTR1Q9GZV5 400 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 HOXD1Q9GZZ0 328 aa8.72□□□□□ -1.01
PDLIM5-223ENST00000627587 RIBC2Q9H4K1 309 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms