RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 MAGED1Q9Y5V3 778 aaPredicted RBP12.87□□□□□ -0.35
TUBB3-215ENST00000625617 GPC6Q9Y625 555 aaPredicted RBP12.87□□□□□ -0.35
TUBB3-215ENST00000625617 NPIPA5A0A0B4J1W7 369 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 NPIPA7E9PJI5 369 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 COPEO14579 308 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 ZNF195O14628 629 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 SCAMP2O15127 329 aaKnown RBP12.86□□□□□ -0.35
TUBB3-215ENST00000625617 PRKD3O94806 890 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 NTN1O95631 604 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 TP53P04637 393 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-215ENST00000625617 LINC00032P0C843 101 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 DANCRP0C864 163 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 NPIPA8P0DM63 369 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 SLC7A1P30825 629 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 IDUAP35475 653 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 CDKN1AP38936 164 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 RNF144AP50876 292 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-215ENST00000625617 P2RX1P51575 399 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 FAPQ12884 760 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 SELENBP1Q13228 472 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 MLC1Q15049 377 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 P2RY6Q15077 328 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 TMEM176BQ3YBM2 270 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-215ENST00000625617 ZNF672Q499Z4 452 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-215ENST00000625617 KANK2Q63ZY3 851 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 CDC73Q6P1J9 531 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 CBLN3Q6UW01 205 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 LRIG3Q6UXM1 1119 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 DDIASQ8IXT1 998 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 SLC43A2Q8N370 569 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 ZNF614Q8N883 585 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 ATP6V1C2Q8NEY4 427 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 KBTBD8Q8NFY9 601 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 SMAP2Q8WU79 429 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-215ENST00000625617 NEUROG1Q92886 237 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 USB1Q9BQ65 265 aaKnown RBP12.86□□□□□ -0.35
TUBB3-215ENST00000625617 REG4Q9BYZ8 158 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 HOXD1Q9GZZ0 328 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 C12orf65Q9H3J6 166 aaKnown RBP12.86□□□□□ -0.35
TUBB3-215ENST00000625617 TUBB1Q9H4B7 451 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 KLHL9Q9P2J3 617 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 ICAM5Q9UMF0 924 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 CARD8Q9Y2G2 431 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 DNAJC15Q9Y5T4 150 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 ACTL7BQ9Y614 415 aa12.86□□□□□ -0.35
TUBB3-215ENST00000625617 ZANQ9Y493 2812 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 SMIM23A6NLE4 172 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 TMEM114B3SHH9 223 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 OIP5O43482 229 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 ADAP00813 363 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 FESP07332 822 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 YES1P07947 543 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 KRT16P08779 473 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 BCKDHAP12694 445 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 PRKCAP17252 672 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 MAPK1P28482 360 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 ACVR1BP36896 505 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 RPL3P39023 403 aaKnown RBP12.85□□□□□ -0.35
TUBB3-215ENST00000625617 CCR4P51679 360 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 BSPH1Q075Z2 132 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 ITGADQ13349 1161 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 TP53BP2Q13625 1128 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 STK11Q15831 433 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 NDUFAF6Q330K2 333 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 SPDYE7PQ495Y7 208 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 DCST2Q5T1A1 773 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 BHLHA15Q7RTS1 189 aaPredicted RBP12.85□□□□□ -0.35
TUBB3-215ENST00000625617 ATG4DQ86TL0 474 aaPredicted RBP12.85□□□□□ -0.35
TUBB3-215ENST00000625617 C10orf107Q8IVU9 208 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 GSPT2Q8IYD1 628 aaKnown RBP12.85□□□□□ -0.35
TUBB3-215ENST00000625617 TMCO5AQ8N6Q1 288 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 OR56A1Q8NGH5 318 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 TWIST2Q8WVJ9 160 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 MRGPRX4Q96LA9 322 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 ACTRT3Q9BYD9 372 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 SLCO5A1Q9H2Y9 848 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 ALG2Q9H553 416 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 ATP6V1HQ9UI12 483 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 FAF1Q9UNN5 650 aaPredicted RBP12.85□□□□□ -0.35
TUBB3-215ENST00000625617 LIPT1Q9Y234 373 aa12.85□□□□□ -0.35
TUBB3-215ENST00000625617 IGHV3-15A0A0B4J1V0 119 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 GTPBP1O00178 669 aaKnown RBP12.84□□□□□ -0.35
TUBB3-215ENST00000625617 EFNA2O43921 213 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 SHBGP04278 402 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 ENPP1P22413 925 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 PCLAFQ15004 111 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 TOMM34Q15785 309 aaPredicted RBP12.84□□□□□ -0.35
TUBB3-215ENST00000625617 KLHL26Q53HC5 615 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.84□□□□□ -0.35
TUBB3-215ENST00000625617 SEZ6L2Q6UXD5 910 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 Q6ZT83 130 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 HOMEZQ8IX15 550 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 OR7A2PQ8NGA2 310 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 PIWIL2Q8TC59 973 aaKnown RBP12.84□□□□□ -0.35
TUBB3-215ENST00000625617 ADAMTS15Q8TE58 950 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 HS6ST2Q96MM7 605 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 RHOXF2Q9BQY4 288 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 GATA5Q9BWX5 397 aaPredicted RBP12.84□□□□□ -0.35
TUBB3-215ENST00000625617 TRIM2Q9C040 744 aa12.84□□□□□ -0.35
TUBB3-215ENST00000625617 CXorf36Q9H7Y0 433 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms