RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 OR4N2Q8NGD1 307 aa15.07■□□□□ 0
LDB3-208ENST00000623007 DOK4Q8TEW6 326 aa15.07■□□□□ 0
LDB3-208ENST00000623007 DTNBP1Q96EV8 351 aa15.07■□□□□ 0
LDB3-208ENST00000623007 LOXL4Q96JB6 756 aa15.07■□□□□ 0
LDB3-208ENST00000623007 GFM1Q96RP9 751 aaKnown RBP15.07■□□□□ 0
LDB3-208ENST00000623007 NDEL1Q9GZM8 345 aa15.07■□□□□ 0
LDB3-208ENST00000623007 EGLN3Q9H6Z9 239 aa15.07■□□□□ 0
LDB3-208ENST00000623007 AMBNQ9NP70 447 aa15.07■□□□□ 0
LDB3-208ENST00000623007 MKL2Q9ULH7 1088 aa15.07■□□□□ 0
LDB3-208ENST00000623007 EXOSC1Q9Y3B2 195 aaKnown RBP15.07■□□□□ 0
LDB3-208ENST00000623007 U3KQA8 63 aa15.07■□□□□ 0
LDB3-208ENST00000623007 NPIPA5A0A0B4J1W7 369 aa15.06■□□□□ 0
LDB3-208ENST00000623007 IGHV5-10-1A0A0J9YXX1 117 aa15.06■□□□□ 0
LDB3-208ENST00000623007 A0A1B0GWA3 101 aa15.06■□□□□ 0
LDB3-208ENST00000623007 A0A1W2PPW3 197 aa15.06■□□□□ 0
LDB3-208ENST00000623007 NPIPA7E9PJI5 369 aa15.06■□□□□ 0
LDB3-208ENST00000623007 SURF4O15260 269 aa15.06■□□□□ 0
LDB3-208ENST00000623007 PRKYO43930 277 aa15.06■□□□□ 0
LDB3-208ENST00000623007 LYPD3O95274 346 aa15.06■□□□□ 0
LDB3-208ENST00000623007 PDGFBP01127 241 aaPredicted RBP15.06■□□□□ 0
LDB3-208ENST00000623007 NPIPA8P0DM63 369 aa15.06■□□□□ 0
LDB3-208ENST00000623007 PRG2P13727 222 aa15.06■□□□□ 0
LDB3-208ENST00000623007 IL12BP29460 328 aa15.06■□□□□ 0
LDB3-208ENST00000623007 UGT2B10P36537 528 aa15.06■□□□□ 0
LDB3-208ENST00000623007 PNLIPRP2P54317 469 aa15.06■□□□□ 0
LDB3-208ENST00000623007 NXNL2Q5VZ03 156 aa15.06■□□□□ 0
LDB3-208ENST00000623007 WBP2NLQ6ICG8 309 aa15.06■□□□□ 0
LDB3-208ENST00000623007 LINC00114Q6XXX2 140 aa15.06■□□□□ 0
LDB3-208ENST00000623007 RTL4Q6ZR62 310 aa15.06■□□□□ 0
LDB3-208ENST00000623007 EID2Q8N6I1 236 aa15.06■□□□□ 0
LDB3-208ENST00000623007 ANKK1Q8NFD2 765 aa15.06■□□□□ 0
LDB3-208ENST00000623007 RNF217Q8TC41 542 aa15.06■□□□□ 0
LDB3-208ENST00000623007 FANK1Q8TC84 345 aa15.06■□□□□ 0
LDB3-208ENST00000623007 METTL21AQ8WXB1 218 aa15.06■□□□□ 0
LDB3-208ENST00000623007 ADIPOR1Q96A54 375 aa15.06■□□□□ 0
LDB3-208ENST00000623007 ZNF582Q96NG8 517 aaPredicted RBP15.06■□□□□ 0
LDB3-208ENST00000623007 DCUN1D5Q9BTE7 237 aa15.06■□□□□ 0
LDB3-208ENST00000623007 PRR14Q9BWN1 585 aa15.06■□□□□ 0
LDB3-208ENST00000623007 VN1R1Q9GZP7 353 aa15.06■□□□□ 0
LDB3-208ENST00000623007 FGF20Q9NP95 211 aaPredicted RBP15.06■□□□□ 0
LDB3-208ENST00000623007 ISYNA1Q9NPH2 558 aa15.06■□□□□ 0
LDB3-208ENST00000623007 SEC14L4Q9UDX3 406 aa15.06■□□□□ 0
LDB3-208ENST00000623007 NXT1Q9UKK6 140 aaKnown RBP15.06■□□□□ 0
LDB3-208ENST00000623007 DTX4Q9Y2E6 619 aa15.06■□□□□ 0
LDB3-208ENST00000623007 PCDHGB2Q9Y5G2 931 aa15.06■□□□□ 0
LDB3-208ENST00000623007 PCDH15Q96QU1 1955 aa15.06■□□□□ 0
LDB3-208ENST00000623007 A0A1W2PQM1 296 aa15.06■□□□□ 0
LDB3-208ENST00000623007 EFCAB9A8MZ26 197 aa15.06■□□□□ 0
LDB3-208ENST00000623007 MYL12BO14950 172 aa15.06■□□□□ 0
LDB3-208ENST00000623007 SCRG1O75711 98 aa15.06■□□□□ 0
LDB3-208ENST00000623007 GP1BAP07359 652 aa15.06■□□□□ 0
LDB3-208ENST00000623007 UBL4AP11441 157 aa15.06■□□□□ 0
LDB3-208ENST00000623007 GPR4P46093 362 aa15.06■□□□□ 0
LDB3-208ENST00000623007 CAPZA2P47755 286 aa15.06■□□□□ 0
LDB3-208ENST00000623007 NRG3P56975 720 aa15.06■□□□□ 0
LDB3-208ENST00000623007 DCTN2Q13561 401 aaKnown RBP15.06■□□□□ 0
LDB3-208ENST00000623007 NKAIN1Q4KMZ8 207 aa15.06■□□□□ 0
LDB3-208ENST00000623007 TRIM61Q5EBN2 209 aa15.06■□□□□ 0
LDB3-208ENST00000623007 PERM1Q5SV97 790 aa15.06■□□□□ 0
LDB3-208ENST00000623007 SMARCD3Q6STE5 483 aa15.06■□□□□ 0
LDB3-208ENST00000623007 ZNF574Q6ZN55 896 aaPredicted RBP15.06■□□□□ 0
LDB3-208ENST00000623007 SLC46A3Q7Z3Q1 461 aa15.06■□□□□ 0
LDB3-208ENST00000623007 ZAR1Q86SH2 424 aa15.06■□□□□ 0
LDB3-208ENST00000623007 MISPQ8IVT2 679 aa15.06■□□□□ 0
LDB3-208ENST00000623007 SLC34A3Q8N130 599 aa15.06■□□□□ 0
LDB3-208ENST00000623007 LNX2Q8N448 690 aa15.06■□□□□ 0
LDB3-208ENST00000623007 IFI44Q8TCB0 444 aa15.06■□□□□ 0
LDB3-208ENST00000623007 FGF11Q92914 225 aa15.06■□□□□ 0
LDB3-208ENST00000623007 CLIP3Q96DZ5 547 aa15.06■□□□□ 0
LDB3-208ENST00000623007 OR6C1Q96RD1 312 aa15.06■□□□□ 0
LDB3-208ENST00000623007 RHNO1Q9BSD3 238 aa15.06■□□□□ 0
LDB3-208ENST00000623007 PLA2G12AQ9BZM1 189 aa15.06■□□□□ 0
LDB3-208ENST00000623007 OR52D1Q9H346 318 aa15.06■□□□□ 0
LDB3-208ENST00000623007 DNAJC27Q9NZQ0 273 aa15.06■□□□□ 0
LDB3-208ENST00000623007 C19orf25Q9UFG5 118 aaPredicted RBP15.06■□□□□ 0
LDB3-208ENST00000623007 KNL1Q8NG31 2342 aa15.05■□□□□ 0
LDB3-208ENST00000623007 CCRL2O00421 344 aa15.05■□□□□ -0
LDB3-208ENST00000623007 DLL1O00548 723 aa15.05■□□□□ -0
LDB3-208ENST00000623007 ZNF264O43296 627 aa15.05■□□□□ -0
LDB3-208ENST00000623007 EIF4E2O60573 245 aaKnown RBP15.05■□□□□ -0
LDB3-208ENST00000623007 CLPXO76031 633 aa15.05■□□□□ -0
LDB3-208ENST00000623007 LCKP06239 509 aa15.05■□□□□ -0
LDB3-208ENST00000623007 SAGP10523 405 aaPredicted RBP15.05■□□□□ -0
LDB3-208ENST00000623007 FGF5P12034 268 aa15.05■□□□□ -0
LDB3-208ENST00000623007 SLC6A6P31641 620 aa15.05■□□□□ -0
LDB3-208ENST00000623007 MTNR1AP48039 350 aa15.05■□□□□ -0
LDB3-208ENST00000623007 CLK1P49759 484 aaKnown RBP15.05■□□□□ -0
LDB3-208ENST00000623007 SRSF5Q13243 272 aaKnown RBP15.05■□□□□ -0
LDB3-208ENST00000623007 EBPQ15125 230 aaKnown RBP15.05■□□□□ -0
LDB3-208ENST00000623007 MOGQ16653 247 aa15.05■□□□□ -0
LDB3-208ENST00000623007 ARMCX4Q5H9R4 360 aa15.05■□□□□ -0
LDB3-208ENST00000623007 SHISA5Q8N114 240 aa15.05■□□□□ -0
LDB3-208ENST00000623007 KBTBD8Q8NFY9 601 aa15.05■□□□□ -0
LDB3-208ENST00000623007 STT3BQ8TCJ2 826 aa15.05■□□□□ -0
LDB3-208ENST00000623007 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.05■□□□□ -0
LDB3-208ENST00000623007 TSLPQ969D9 159 aa15.05■□□□□ -0
LDB3-208ENST00000623007 LGALS12Q96DT0 336 aa15.05■□□□□ -0
LDB3-208ENST00000623007 CCDC74BQ96LY2 380 aa15.05■□□□□ -0
LDB3-208ENST00000623007 MGLLQ99685 303 aa15.05■□□□□ -0
LDB3-208ENST00000623007 NAA50Q9GZZ1 169 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms