RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 PTGDSP41222 190 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 ACAA2P42765 397 aaKnown RBP16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 AQP4P55087 323 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 TAS2R41P59536 307 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 C17orf67Q0P5P2 114 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 FOXD4Q12950 439 aaPredicted RBP16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 SNTA1Q13424 505 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 TUBA3CQ13748 450 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 LRRC36Q1X8D7 754 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 ENTPD8Q5MY95 495 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 TMEM81Q6P7N7 255 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 TUBA3EQ6PEY2 450 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 MDGA2Q7Z553 956 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 FDCSPQ8NFU4 85 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 PHF10Q8WUB8 498 aaKnown RBP16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 ZNF559Q9BR84 538 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 ZNF552Q9H707 407 aaPredicted RBP16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 REEP1Q9H902 201 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 NTN4Q9HB63 628 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 SDHAF3Q9NRP4 125 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 VNN3Q9NY84 501 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 PLA2G3Q9NZ20 509 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 CNIH4Q9P003 139 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 PPP4R1LQ9P1A2 415 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 LRFN1Q9P244 771 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 A4GNTQ9UNA3 340 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 WIF1Q9Y5W5 379 aa16.28■□□□□ 0.2
PTCHD3-202ENST00000622555 MED19A0JLT2 244 aaPredicted RBP16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 FMO6PO60774 539 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 E2F6O75461 281 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 P04436 131 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 LINGO3P0C6S8 592 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 HTR2AP28223 471 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 IST1P53990 364 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 CDH12P55289 794 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 EPS8Q12929 822 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 PPP1R8Q12972 351 aaKnown RBP16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 MFAP5Q13361 173 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 OR5M10Q6IEU7 315 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 SLC30A6Q6NXT4 461 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 ZNF605Q86T29 641 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 TSPYL5Q86VY4 417 aaPredicted RBP16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 FNDC11Q9BVV2 318 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 CPNE5Q9HCH3 593 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 ACAD8Q9UKU7 415 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 SAMHD1Q9Y3Z3 626 aaKnown RBP16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 U3KQV3 271 aa16.27■□□□□ 0.19
PTCHD3-202ENST00000622555 A6NHS1 94 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 SAC3D1A6NKF1 404 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 H0YJX3 145 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 DPM1O60762 260 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 PRSS23O95084 383 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 ITPKBP27987 946 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 IFNA8P32881 189 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 OR1Q1Q15612 314 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 UNQ6494/PRO21346Q6UXR6 183 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 ZNF227Q86WZ6 799 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 PSD4Q8NDX1 1056 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 OR52J3Q8NH60 311 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 B4GALNT2Q8NHY0 566 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 ADAMTS16Q8TE57 1224 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 NR4A3Q92570 626 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 ANGPTL4Q9BY76 406 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 NMNAT1Q9HAN9 279 aaPredicted RBP16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 TMEM27Q9HBJ8 222 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 TIMMDC1Q9NPL8 285 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 SACM1LQ9NTJ5 587 aa16.26■□□□□ 0.19
PTCHD3-202ENST00000622555 G3V3Y1 287 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 GADD45GO95257 159 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 NUDT14O95848 222 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 H1F0P07305 194 aaKnown RBP16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 ZNF23P17027 643 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 SLC6A8P48029 635 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 P2RX1P51575 399 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 COPZ1P61923 177 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 OR1C1Q15619 314 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 COL28A1Q2UY09 1125 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 SPINK14Q6IE38 97 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 CADM2Q8N3J6 435 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 TOR1AIP2Q8NFQ8 470 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 OR5W2Q8NH69 310 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 TRIM2Q9C040 744 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 POLR2J2Q9GZM3 115 aaKnown RBP16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 POLR2J3Q9H1A7 115 aaKnown RBP16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 ACER3Q9NUN7 267 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 ICAM5Q9UMF0 924 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 LYVE1Q9Y5Y7 322 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 FRYQ5TBA9 3013 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 MAGEA13PA6NCF6 341 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 ANKRD33BA6NCL7 494 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 K7ENP7 123 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 TNFRSF11BO00300 401 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 CDK2AP1O14519 115 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 DENRO43583 198 aaKnown RBP16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 CEACAM4O75871 244 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 OR5F1O95221 314 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 ZNF26P17031 533 aaPredicted RBP16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 FUT4P22083 530 aa16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 DNAJA1P31689 397 aaKnown RBP16.25■□□□□ 0.19
PTCHD3-202ENST00000622555 SMIM11AP58511 58 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms