RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 APCDD1LQ8NCL9 501 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 WDR77Q9BQA1 342 aaPredicted RBP19.71■□□□□ 0.75
SPAST-204ENST00000621856 EGLN3Q9H6Z9 239 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 B3GALT1Q9Y5Z6 326 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 TEX51A0A1B0GUA7 166 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 PRR33A8MZF0 331 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 KPNA4O00629 521 aaPredicted RBP19.71■□□□□ 0.75
SPAST-204ENST00000621856 HTR1AP08908 422 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 ADH7P40394 386 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 NRG3P56975 720 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 COPZ1P61923 177 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 PSPHP78330 225 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 CD226Q15762 336 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 ALG10BQ5I7T1 473 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 DESI1Q6ICB0 168 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 RAB11FIP2Q7L804 512 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 TMCO5AQ8N6Q1 288 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 PFN4Q8NHR9 129 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 TP53INP1Q96A56 240 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 HS6ST2Q96MM7 605 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 PHOX2BQ99453 314 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 DUSP21Q9H596 190 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 CCNB1IP1Q9NPC3 277 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 CLN6Q9NWW5 311 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 ERVK-18Q9QC07 812 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 PPIEQ9UNP9 301 aaKnown RBP19.71■□□□□ 0.75
SPAST-204ENST00000621856 MED31Q9Y3C7 131 aa19.71■□□□□ 0.75
SPAST-204ENST00000621856 PTRH2Q9Y3E5 179 aaKnown RBP19.71■□□□□ 0.75
SPAST-204ENST00000621856 IFI30P13284 250 aa19.7■□□□□ 0.74
SPAST-204ENST00000621856 CCR4P51679 360 aa19.7■□□□□ 0.74
SPAST-204ENST00000621856 SMSP52788 366 aa19.7■□□□□ 0.74
SPAST-204ENST00000621856 PNLIPRP2P54317 469 aa19.7■□□□□ 0.74
SPAST-204ENST00000621856 CLDN6P56747 220 aa19.7■□□□□ 0.74
SPAST-204ENST00000621856 SLC35A2P78381 396 aa19.7■□□□□ 0.74
SPAST-204ENST00000621856 KIRREL2Q6UWL6 708 aa19.7■□□□□ 0.74
SPAST-204ENST00000621856 CDK20Q8IZL9 346 aa19.7■□□□□ 0.74
SPAST-204ENST00000621856 FAM71CQ8NEG0 241 aa19.7■□□□□ 0.74
SPAST-204ENST00000621856 IPCEF1Q8WWN9 437 aaPredicted RBP19.7■□□□□ 0.74
SPAST-204ENST00000621856 TMEM5Q9Y2B1 443 aa19.7■□□□□ 0.74
SPAST-204ENST00000621856 ZNF318Q5VUA4 2279 aa19.7■□□□□ 0.74
SPAST-204ENST00000621856 ZNF264O43296 627 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 KLF4O43474 513 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 GIPRP48546 466 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 SLC26A5P58743 744 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 PRKCDQ05655 676 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 PMS2P3Q13401 168 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 NCF4Q15080 339 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 ISXQ2M1V0 245 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 FAM69BQ5VUD6 431 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 ULK3Q6PHR2 472 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 APOOLQ6UXV4 268 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 POGLUT1Q8NBL1 392 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 THAP3Q8WTV1 239 aaPredicted RBP19.69■□□□□ 0.74
SPAST-204ENST00000621856 MPP4Q96JB8 637 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 IL4I1Q96RQ9 567 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 RHNO1Q9BSD3 238 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 PLA2G12AQ9BZM1 189 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 SLC25A19Q9HC21 320 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 PLCXD1Q9NUJ7 323 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 TBC1D23Q9NUY8 699 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 TVP23BQ9NYZ1 205 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 PISDQ9UG56 409 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 CARD8Q9Y2G2 431 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 WDR87Q6ZQQ6 2873 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 A0A0C4DFX4 3053 aa19.69■□□□□ 0.74
SPAST-204ENST00000621856 OIP5O43482 229 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 RGS10O43665 173 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 JMJD7P0C870 316 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 NUDT6P53370 316 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 CDK5Q00535 292 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 AHSA2Q719I0 299 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 LSRQ86X29 649 aaPredicted RBP19.68■□□□□ 0.74
SPAST-204ENST00000621856 WDR36Q8NI36 951 aaKnown RBP19.68■□□□□ 0.74
SPAST-204ENST00000621856 NUBPLQ8TB37 319 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 OSTF1Q92882 214 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 DGCR14Q96DF8 476 aaKnown RBP19.68■□□□□ 0.74
SPAST-204ENST00000621856 DPH1Q9BZG8 443 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 EXOSC3Q9NQT5 275 aaKnown RBP19.68■□□□□ 0.74
SPAST-204ENST00000621856 UNC119BA6NIH7 251 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 TNFRSF10AO00220 468 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 CSO75390 466 aaKnown RBP19.68■□□□□ 0.74
SPAST-204ENST00000621856 STK17BO94768 372 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 JUNBP17275 347 aaPredicted RBP19.68■□□□□ 0.74
SPAST-204ENST00000621856 RBM34P42696 430 aaKnown RBP19.68■□□□□ 0.74
SPAST-204ENST00000621856 SNRPGP62308 76 aaKnown RBP19.68■□□□□ 0.74
SPAST-204ENST00000621856 SKP2Q13309 424 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 ZBED5Q49AG3 693 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 SLC27A4Q6P1M0 643 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 C16orf47Q6ZP98 133 aaPredicted RBP19.68■□□□□ 0.74
SPAST-204ENST00000621856 OR8D4Q8NGM9 314 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 TRUB1Q8WWH5 349 aaKnown RBP19.68■□□□□ 0.74
SPAST-204ENST00000621856 TAAR9Q96RI9 348 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 TBL1XR1Q9BZK7 514 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 RBM38Q9H0Z9 239 aaKnown RBP19.68■□□□□ 0.74
SPAST-204ENST00000621856 ZBTB20Q9HC78 741 aaPredicted RBP19.68■□□□□ 0.74
SPAST-204ENST00000621856 AMBNQ9NP70 447 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 C20orf141Q9NUB4 165 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 NCDNQ9UBB6 729 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 PSORS1C1Q9UIG5 152 aa19.68■□□□□ 0.74
SPAST-204ENST00000621856 MAKP20794 623 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms