RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 VBP1P61758 197 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 TSPAN31Q12999 210 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 DECR1Q16698 335 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 TMEM71Q6P5X7 295 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 WDR74Q6RFH5 385 aaPredicted RBP9.17□□□□□ -0.94
VTA1-205ENST00000620996 MBOAT2Q6ZWT7 520 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 CADM3Q8N126 398 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 OR8D4Q8NGM9 314 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 OR8J1Q8NGP2 316 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 LILRB4Q8NHJ6 448 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 TMEM239Q8WW34 195 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 SLC41A2Q96JW4 573 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 SAMD8Q96LT4 415 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 PELOQ9BRX2 385 aaKnown RBP9.17□□□□□ -0.94
VTA1-205ENST00000620996 IER2Q9BTL4 223 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 LMF2Q9BU23 707 aaKnown RBP9.17□□□□□ -0.94
VTA1-205ENST00000620996 LANCL2Q9NS86 450 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.17□□□□□ -0.94
VTA1-205ENST00000620996 MN1Q10571 1320 aaPredicted RBP9.17□□□□□ -0.94
VTA1-205ENST00000620996 ARID1BQ8NFD5 2236 aaPredicted RBP9.17□□□□□ -0.94
VTA1-205ENST00000620996 M0R3G1 203 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 DSCR3O14972 297 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 REM1O75628 298 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 PTHP01270 115 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 CT45A8P0DMV1 189 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 CT45A9P0DMV2 189 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 GABRB1P18505 474 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 ATP6V1E1P36543 226 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 NFATC3Q12968 1075 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 DSG2Q14126 1118 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 CT45A2Q5DJT8 189 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 SLC35F1Q5T1Q4 408 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 LANCL3Q6ZV70 420 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 MED25Q71SY5 747 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 SHFQ7M4L6 423 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 OR4C3Q8NH37 302 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 OR51A7Q8NH64 312 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 PHOSPHO1Q8TCT1 267 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 SLC2A12Q8TD20 617 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 PTPMT1Q8WUK0 201 aaPredicted RBP9.17□□□□□ -0.94
VTA1-205ENST00000620996 ZNF501Q96CX3 271 aaPredicted RBP9.17□□□□□ -0.94
VTA1-205ENST00000620996 SH3YL1Q96HL8 342 aaPredicted RBP9.17□□□□□ -0.94
VTA1-205ENST00000620996 IRF2BPLQ9H1B7 796 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 POLE4Q9NR33 117 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 CLDN16Q9Y5I7 305 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 CACNA1EQ15878 2313 aa9.17□□□□□ -0.94
VTA1-205ENST00000620996 GTPBP1O00178 669 aaKnown RBP9.16□□□□□ -0.94
VTA1-205ENST00000620996 RORAP35398 523 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 OMPP47874 163 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 SLC16A1P53985 500 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 COPZ1P61923 177 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 SPCS2Q15005 226 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 ALG10BQ5I7T1 473 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 WDR88Q6ZMY6 472 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 ZNF574Q6ZN55 896 aaPredicted RBP9.16□□□□□ -0.94
VTA1-205ENST00000620996 PRSS42Q7Z5A4 293 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 FANK1Q8TC84 345 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 IFI44Q8TCB0 444 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 THAP3Q8WTV1 239 aaPredicted RBP9.16□□□□□ -0.94
VTA1-205ENST00000620996 RPL3LQ92901 407 aaKnown RBP9.16□□□□□ -0.94
VTA1-205ENST00000620996 DACT3Q96B18 629 aaPredicted RBP9.16□□□□□ -0.94
VTA1-205ENST00000620996 OMA1Q96E52 524 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 CCDC74BQ96LY2 380 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 ADOQ96SZ5 270 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 NXF5Q9H1B4 397 aaKnown RBP9.16□□□□□ -0.94
VTA1-205ENST00000620996 RERGLQ9H628 205 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 C20orf141Q9NUB4 165 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 FLRT3Q9NZU0 649 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 COPS7AQ9UBW8 275 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 TESQ9UGI8 421 aaKnown RBP9.16□□□□□ -0.94
VTA1-205ENST00000620996 MED31Q9Y3C7 131 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 CCDC163A0A0D9SF12 145 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 PNMA8CA0A1B0GUJ8 204 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 A0A1B0GWA3 101 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 A0A1W2PQM1 296 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 UNC119BA6NIH7 251 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 MEN1O00255 615 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 CDC42EP2O14613 210 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 SCRG1O75711 98 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 GCGRP47871 477 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 NR0B1P51843 470 aaKnown RBP9.16□□□□□ -0.94
VTA1-205ENST00000620996 IGLV3-21P80748 117 aaPredicted RBP9.16□□□□□ -0.94
VTA1-205ENST00000620996 ZNF91Q05481 1191 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 DBPQ10586 325 aaPredicted RBP9.16□□□□□ -0.94
VTA1-205ENST00000620996 C12orf73Q69YU5 71 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 FCRLBQ6BAA4 426 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 DESI1Q6ICB0 168 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 POMZP3Q6PJE2 187 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 CYP4Z2PQ8N1L4 340 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 SLC15A4Q8N697 577 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 C10orf53Q8N6V4 93 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 OR52L1Q8NGH7 329 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 DNAJA3Q96EY1 480 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 ZNF559Q9BR84 538 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 ZNF768Q9H5H4 540 aaKnown RBP9.16□□□□□ -0.94
VTA1-205ENST00000620996 ENPP5Q9UJA9 477 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 RARRES3Q9UL19 164 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 RPL36Q9Y3U8 105 aaKnown RBP9.16□□□□□ -0.94
VTA1-205ENST00000620996 MMACHCQ9Y4U1 282 aa9.16□□□□□ -0.94
VTA1-205ENST00000620996 C2orf92A0A1B0GVN3 265 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms