RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ARSGQ96EG1 525 aa18.93■□□□□ 0.62
NEK3-208ENST00000618534 TEAD3Q99594 435 aa18.93■□□□□ 0.62
NEK3-208ENST00000618534 OR51J1Q9H342 316 aa18.93■□□□□ 0.62
NEK3-208ENST00000618534 ELF5Q9UKW6 265 aaPredicted RBP18.93■□□□□ 0.62
NEK3-208ENST00000618534 TEX13CA0A0J9YWL9 993 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 PRR23D1E9PI22 279 aaPredicted RBP18.92■□□□□ 0.62
NEK3-208ENST00000618534 SYPP08247 313 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 PRR23D2P0DMB1 279 aaPredicted RBP18.92■□□□□ 0.62
NEK3-208ENST00000618534 OR12D2P58182 307 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 MTSS1LQ765P7 747 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 PXKQ7Z7A4 578 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 OR4N5Q8IXE1 308 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 OR13C2Q8NGS9 318 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 POF1BQ8WVV4 589 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 TMEM239Q8WW34 195 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 PGLYRP3Q96LB9 341 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 IFT27Q9BW83 186 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 CMC2Q9NRP2 79 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 LYARQ9NX58 379 aaKnown RBP18.92■□□□□ 0.62
NEK3-208ENST00000618534 CLDND1Q9NY35 253 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 NUBP2Q9Y5Y2 271 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 LOC105369274A0A096LPK9 316 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 A0A0B4J203 849 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 MID1O15344 667 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 PAK4O96013 591 aaPredicted RBP18.92■□□□□ 0.62
NEK3-208ENST00000618534 ANXA3P12429 323 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 GIFP27352 417 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 TSFMP43897 325 aaKnown RBP18.92■□□□□ 0.62
NEK3-208ENST00000618534 FOXK2Q01167 660 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 ZNF85Q03923 595 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 ARHGAP11BQ3KRB8 267 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 TJAP1Q5JTD0 557 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 AGBL4Q5VU57 503 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 OR4N4Q8N0Y3 316 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 YIPF5Q969M3 257 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 SDF2Q99470 211 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.92■□□□□ 0.62
NEK3-208ENST00000618534 RANBP3Q9H6Z4 567 aaPredicted RBP18.92■□□□□ 0.62
NEK3-208ENST00000618534 MRPL39Q9NYK5 338 aaKnown RBP18.92■□□□□ 0.62
NEK3-208ENST00000618534 MAT2BQ9NZL9 334 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 MOSPD1Q9UJG1 213 aa18.92■□□□□ 0.62
NEK3-208ENST00000618534 TBC1D3KA0A087X1G2 549 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 CDHR4A6H8M9 788 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 TBC1D3BA6NDS4 549 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 TBC1D3FA6NER0 549 aaPredicted RBP18.91■□□□□ 0.62
NEK3-208ENST00000618534 SLC22A31A6NKX4 558 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 RNGTTO60942 597 aaKnown RBP18.91■□□□□ 0.62
NEK3-208ENST00000618534 FKTNO75072 461 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 SC5DO75845 299 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 ZNF888P0CJ79 500 aaPredicted RBP18.91■□□□□ 0.62
NEK3-208ENST00000618534 CCL5P13501 91 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 CD53P19397 219 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 DGCR2P98153 550 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 OR1Q1Q15612 314 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 EIPR1Q53HC9 387 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 SMUG1Q53HV7 270 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 TBC1D3GQ6DHY5 549 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 TEX261Q6UWH6 196 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 SIAH3Q8IW03 269 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 GPALPP1Q8IXQ4 340 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 TOMM5Q8N4H5 51 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 OR5J2Q8NH18 312 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 SARGQ9BW04 601 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 ADGRL4Q9HBW9 690 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 INPP5EQ9NRR6 644 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 FBXL4Q9UKA2 621 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 U3KQ87 197 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 NPIPA5A0A0B4J1W7 369 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 SYNDIG1LA6NDD5 238 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 FAM86C2PA6NEL3 165 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 NPIPA7E9PJI5 369 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 SLC22A5O76082 557 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 LYPD3O95274 346 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 SBK2P0C263 348 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 NPIPA8P0DM63 369 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 HOXD11P31277 338 aaPredicted RBP18.91■□□□□ 0.62
NEK3-208ENST00000618534 NUDT1P36639 197 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 DUSP8Q13202 625 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 FGL2Q14314 439 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 TRAM1Q15629 374 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 ACSM3Q53FZ2 586 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 CYB561A3Q8NBI2 242 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 ZNF707Q96C28 371 aaPredicted RBP18.91■□□□□ 0.62
NEK3-208ENST00000618534 MAP6Q96JE9 813 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 NTMQ9P121 344 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 SERGEFQ9UGK8 458 aa18.91■□□□□ 0.62
NEK3-208ENST00000618534 BTN3A3O00478 584 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 AGR2O95994 175 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 HNRNPA1P09651 372 aaKnown RBP eCLIP18.9■□□□□ 0.62
NEK3-208ENST00000618534 CMPK1P30085 196 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 CCR6P51684 374 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 TOR2AQ5JU69 321 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 MRPL2Q5T653 305 aaKnown RBP18.9■□□□□ 0.62
NEK3-208ENST00000618534 HACD4Q5VWC8 232 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 CD276Q5ZPR3 534 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 ZNF425Q6IV72 752 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 VN1R4Q7Z5H5 301 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 SYT9Q86SS6 491 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 C7orf57Q8NEG2 295 aa18.9■□□□□ 0.62
NEK3-208ENST00000618534 ZNF680Q8NEM1 530 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms