RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 TUSC5Q8IXB3 177 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 GABRG1Q8N1C3 465 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 RAB3IL1Q8TBN0 382 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 AGR3Q8TD06 166 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 AKAP1Q92667 903 aaKnown RBP eCLIP18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 REXO5Q96IC2 774 aaKnown RBP18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 APOPT1Q96IL0 206 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 PPP3R2Q96LZ3 170 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 ACTRT3Q9BYD9 372 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 CXorf36Q9H7Y0 433 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 COQ10BQ9H8M1 238 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 MKS1Q9NXB0 559 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 KLHL13Q9P2N7 655 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 CARD8Q9Y2G2 431 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 KCNE3Q9Y6H6 103 aa18.5■□□□□ 0.55
TRAPPC3-208ENST00000616074 INAFM1C9JVW0 142 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 ZNF195O14628 629 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 PEX11AO75192 247 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 ADH6P28332 368 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 MAPK1P28482 360 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 RPL3P39023 403 aaKnown RBP18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 CCT3P49368 545 aaKnown RBP18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 RNPS1Q15287 305 aaKnown RBP18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 NDUFAF6Q330K2 333 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 BANPQ8N9N5 519 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 ZNF527Q8NB42 609 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 STEAP2Q8NFT2 490 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 OR56A1Q8NGH5 318 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 PSMA8Q8TAA3 256 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 ADAMTS15Q8TE58 950 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 OR5P2Q8WZ92 322 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 TACO1Q9BSH4 297 aaKnown RBP18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 C1orf50Q9BV19 199 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 HOXD1Q9GZZ0 328 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 TIGARQ9NQ88 270 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 GPATCH2Q9NW75 528 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 ACTL7BQ9Y614 415 aa18.49■□□□□ 0.55
TRAPPC3-208ENST00000616074 TMCC2O75069 709 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 C6orf47O95873 294 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 SUMO3P55854 103 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 ATP5J2P56134 94 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 TMEM176BQ3YBM2 270 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 ZCCHC23Q6ZST2 131 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 FCRLAQ7L513 359 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 HOMEZQ8IX15 550 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 ATP6V1C2Q8NEY4 427 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 GPR119Q8TDV5 335 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 ZFP90Q8TF47 636 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 ZNF524Q96C55 264 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 C3orf30Q96M34 536 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 ANKZF1Q9H8Y5 726 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 EML4Q9HC35 981 aaKnown RBP18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 SLC17A7Q9P2U7 560 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 FAF1Q9UNN5 650 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 LAMP3Q9UQV4 416 aa18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 GPC6Q9Y625 555 aaPredicted RBP18.48■□□□□ 0.55
TRAPPC3-208ENST00000616074 TLDC2A0PJX2 215 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 GJE1A6NN92 205 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 KIAA1324LA8MWY0 1029 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 H3BNH8 94 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 PRKD3O94806 890 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 PRKCAP17252 672 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 ARRB2P32121 409 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 ATP12AP54707 1039 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 CAPRIN1Q14444 709 aaKnown RBP18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 SPDYE7PQ495Y7 208 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 ATP6AP1LQ52LC2 224 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 SFRP5Q5T4F7 317 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 KRTCAP2Q8N6L1 136 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 ZNF614Q8N883 585 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 OR2W6PQ8NHA6 318 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 LILRB1Q8NHL6 650 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 HDHD5Q9BXW7 423 aa18.47■□□□□ 0.55
TRAPPC3-208ENST00000616074 IGHV3-15A0A0B4J1V0 119 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 NPIPB9F8W1W9 429 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 GTPBP1O00178 669 aaKnown RBP18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 SLU7O95391 586 aaKnown RBP18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 KRT16P08779 473 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 ENPP1P22413 925 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 IL32P24001 234 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 RPS4XP62701 263 aaKnown RBP18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 PPP2R2BQ00005 443 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 TAB1Q15750 504 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 C6orf136Q5SQH8 315 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 IL23RQ5VWK5 629 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 ADAM5Q6NVV9 412 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 ZNF619Q8N2I2 560 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 FNDC5Q8NAU1 212 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 OR5D16Q8NGK9 328 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 OR5AK3PQ8NH89 298 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 RFWD2Q8NHY2 731 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 SFXN5Q8TD22 340 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 COQ8BQ96D53 544 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 OR7D2Q96RA2 312 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 GP6Q9HCN6 339 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 ATAD3AQ9NVI7 634 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 DTNAQ9Y4J8 743 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 RNF115Q9Y4L5 304 aa18.46■□□□□ 0.55
TRAPPC3-208ENST00000616074 A0A1W2PNR3 127 aa18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 CLOCKO15516 846 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms