RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ABCA11PQ4W5N1 156 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 PRAMEF20Q5VT98 475 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 OR5M10Q6IEU7 315 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 TMEM64Q6YI46 380 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 CMIPQ8IY22 773 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 FBXL6Q8N531 539 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 DUSP19Q8WTR2 217 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 SLC38A5Q8WUX1 472 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 TNFAIP8L1Q8WVP5 186 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 FRMD6Q96NE9 622 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 STACQ99469 402 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 A4GALTQ9NPC4 353 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 ST14Q9Y5Y6 855 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 GGT3PA6NGU5 568 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 SSTR4P31391 388 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 EIF1P41567 113 aaKnown RBP8.8□□□□□ -1
CLTCL1-208ENST00000615606 IST1P53990 364 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 B4GALNT1Q00973 533 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 OLFML2AQ68BL7 652 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 RNF113BQ8IZP6 322 aaKnown RBP8.8□□□□□ -1
CLTCL1-208ENST00000615606 ANKK1Q8NFD2 765 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 WDR20Q8TBZ3 569 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 HOXB13Q92826 284 aaPredicted RBP8.8□□□□□ -1
CLTCL1-208ENST00000615606 DDX31Q9H8H2 851 aaKnown RBP8.8□□□□□ -1
CLTCL1-208ENST00000615606 SPEF1Q9Y4P9 236 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 COL11A1P12107 1806 aaPredicted RBP8.8□□□□□ -1
CLTCL1-208ENST00000615606 IDSB3KWA1 339 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 SYT5O00445 386 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 MTRF1O75570 445 aaKnown RBP8.8□□□□□ -1
CLTCL1-208ENST00000615606 S100A9P06702 114 aaKnown RBP8.8□□□□□ -1
CLTCL1-208ENST00000615606 CKMT1AP12532 417 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 GRPRP30550 384 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 GFERP55789 205 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 FAM53BQ14153 422 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 GRAMD2AQ8IUY3 354 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 MS4A15Q8N5U1 240 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 NAXEQ8NCW5 288 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 STT3BQ8TCJ2 826 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 S100A16Q96FQ6 103 aaKnown RBP8.8□□□□□ -1
CLTCL1-208ENST00000615606 A6NLC8 198 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 FBP2O00757 339 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 MOSPD3O75425 235 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 TNFSF15O95150 251 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 DPP4P27487 766 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 MSX1P28360 303 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 GRK5P34947 590 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 DRD3P35462 400 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 ENTPD1P49961 510 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 EIF3IQ13347 325 aaKnown RBP8.8□□□□□ -1
CLTCL1-208ENST00000615606 FZD2Q14332 565 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 SPHARQ15513 63 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 BCL2L15Q5TBC7 163 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 IQCF1Q8N6M8 205 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 GALNT6Q8NCL4 622 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 OR8K3Q8NH51 312 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 SPRYD4Q8WW59 207 aaPredicted RBP8.8□□□□□ -1
CLTCL1-208ENST00000615606 HAVCR1Q96D42 359 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 ENKD1Q9H0I2 346 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 CST11Q9H112 138 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 IL20RAQ9UHF4 553 aa8.8□□□□□ -1
CLTCL1-208ENST00000615606 TUBGCP6Q96RT7 1819 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 IGLV3-16A0A075B6K0 115 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 MITFO75030 526 aaPredicted RBP8.79□□□□□ -1
CLTCL1-208ENST00000615606 NUDT7P0C024 238 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 PRKAR1BP31321 381 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 APLNRP35414 380 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 NXPH1P58417 271 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 CCL7P80098 99 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 MAD2L1BPQ15013 274 aaPredicted RBP8.79□□□□□ -1
CLTCL1-208ENST00000615606 PODNL1Q6PEZ8 512 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 TIGD4Q8IY51 512 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 OR2A1Q8NGT9 310 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 ELP5Q8TE02 316 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 THOC3Q96J01 351 aaKnown RBP8.79□□□□□ -1
CLTCL1-208ENST00000615606 PIGQQ9BRB3 760 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 TMEM165Q9HC07 324 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 PARPBPQ9NWS1 579 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 SLAMF8Q9P0V8 285 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 ERVK-18Q9QC07 812 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 TCRBV3S1A0A5B6 114 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 PRAMEF25A6NGN4 478 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 B3GALT4O96024 378 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 MT-ND2P03891 347 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 STSP08842 583 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 IRF2P14316 349 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 ZNF12P17014 697 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 GLP1RP43220 463 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 GNG2P59768 71 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 SPEM2Q0P670 501 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 MAP4K2Q12851 820 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 SELPLGQ14242 412 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 GPNMBQ14956 572 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 TMEM176BQ3YBM2 270 aaPredicted RBP8.79□□□□□ -1
CLTCL1-208ENST00000615606 LRRN1Q6UXK5 716 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 RETREG3Q86VR2 466 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 CPOQ8IVL8 374 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 GALNT15Q8N3T1 639 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 MARVELD2Q8N4S9 558 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 CNEP1R1Q8N9A8 125 aa8.79□□□□□ -1
CLTCL1-208ENST00000615606 TUBB1Q9H4B7 451 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms