RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 TOR1AIP2Q8NFQ8 470 aa15.04■□□□□ -0
IRF1-211ENST00000613424 OR5W2Q8NH69 310 aa15.04■□□□□ -0
IRF1-211ENST00000613424 BBS10Q8TAM1 723 aa15.04■□□□□ -0
IRF1-211ENST00000613424 ARSGQ96EG1 525 aa15.04■□□□□ -0
IRF1-211ENST00000613424 WDYHV1Q96HA8 205 aa15.04■□□□□ -0
IRF1-211ENST00000613424 NPAS1Q99742 590 aa15.04■□□□□ -0
IRF1-211ENST00000613424 PIGQQ9BRB3 760 aa15.04■□□□□ -0
IRF1-211ENST00000613424 ALKBH4Q9NXW9 302 aa15.04■□□□□ -0
IRF1-211ENST00000613424 ZNF337Q9Y3M9 751 aa15.04■□□□□ -0
IRF1-211ENST00000613424 FAM47E-STBD1D6RA91 191 aa15.03■□□□□ -0
IRF1-211ENST00000613424 DNAJA2O60884 412 aa15.03■□□□□ -0
IRF1-211ENST00000613424 LINGO3P0C6S8 592 aa15.03■□□□□ -0
IRF1-211ENST00000613424 ESRRAP11474 423 aaPredicted RBP15.03■□□□□ -0
IRF1-211ENST00000613424 NID1P14543 1247 aa15.03■□□□□ -0
IRF1-211ENST00000613424 ZNF41P51814 821 aaPredicted RBP15.03■□□□□ -0
IRF1-211ENST00000613424 PLAURQ03405 335 aa15.03■□□□□ -0
IRF1-211ENST00000613424 RBBP4Q09028 425 aa15.03■□□□□ -0
IRF1-211ENST00000613424 CBFBQ13951 182 aa15.03■□□□□ -0
IRF1-211ENST00000613424 TOMM34Q15785 309 aaPredicted RBP15.03■□□□□ -0
IRF1-211ENST00000613424 PLPPR5Q32ZL2 321 aa15.03■□□□□ -0
IRF1-211ENST00000613424 MRPL2Q5T653 305 aaKnown RBP15.03■□□□□ -0
IRF1-211ENST00000613424 ENPP6Q6UWR7 440 aa15.03■□□□□ -0
IRF1-211ENST00000613424 CMIPQ8IY22 773 aa15.03■□□□□ -0
IRF1-211ENST00000613424 FAM26EQ8N5C1 309 aa15.03■□□□□ -0
IRF1-211ENST00000613424 CCDC197Q8NCU1 140 aa15.03■□□□□ -0
IRF1-211ENST00000613424 CNOT9Q92600 299 aaKnown RBP15.03■□□□□ -0
IRF1-211ENST00000613424 ZBTB8AQ96BR9 441 aa15.03■□□□□ -0
IRF1-211ENST00000613424 ZNF524Q96C55 264 aa15.03■□□□□ -0
IRF1-211ENST00000613424 ECSITQ9BQ95 431 aa15.03■□□□□ -0
IRF1-211ENST00000613424 GPATCH1Q9BRR8 931 aaKnown RBP15.03■□□□□ -0
IRF1-211ENST00000613424 PRDM14Q9GZV8 571 aa15.03■□□□□ -0
IRF1-211ENST00000613424 TP63Q9H3D4 680 aaPredicted RBP15.03■□□□□ -0
IRF1-211ENST00000613424 PIF1Q9H611 641 aa15.03■□□□□ -0
IRF1-211ENST00000613424 ZNF232Q9UNY5 417 aa15.03■□□□□ -0
IRF1-211ENST00000613424 CAMK2AQ9UQM7 478 aa15.03■□□□□ -0
IRF1-211ENST00000613424 ZNF443Q9Y2A4 671 aaPredicted RBP15.03■□□□□ -0
IRF1-211ENST00000613424 MEMO1Q9Y316 297 aa15.03■□□□□ -0
IRF1-211ENST00000613424 IFT52Q9Y366 437 aa15.03■□□□□ -0
IRF1-211ENST00000613424 HEATR5AQ86XA9 2040 aa15.03■□□□□ -0
IRF1-211ENST00000613424 MYO7BQ6PIF6 2116 aa15.02■□□□□ -0
IRF1-211ENST00000613424 E9PLN8 166 aa15.02■□□□□ -0
IRF1-211ENST00000613424 LINC01387J3KSC0 135 aa15.02■□□□□ -0
IRF1-211ENST00000613424 AGFG2O95081 481 aa15.02■□□□□ -0
IRF1-211ENST00000613424 THBS1P07996 1170 aa15.02■□□□□ -0
IRF1-211ENST00000613424 PABPC4LP0CB38 370 aaKnown RBP15.02■□□□□ -0
IRF1-211ENST00000613424 ETS2P15036 469 aa15.02■□□□□ -0
IRF1-211ENST00000613424 CPN1P15169 458 aa15.02■□□□□ -0
IRF1-211ENST00000613424 LHX2P50458 406 aa15.02■□□□□ -0
IRF1-211ENST00000613424 CCR4P51679 360 aa15.02■□□□□ -0
IRF1-211ENST00000613424 EEF1A1P68104 462 aaKnown RBP15.02■□□□□ -0
IRF1-211ENST00000613424 ART3Q13508 389 aa15.02■□□□□ -0
IRF1-211ENST00000613424 LARS2Q15031 903 aaKnown RBP15.02■□□□□ -0
IRF1-211ENST00000613424 LIN52Q52LA3 116 aa15.02■□□□□ -0
IRF1-211ENST00000613424 ZNF311Q5JNZ3 666 aa15.02■□□□□ -0
IRF1-211ENST00000613424 ZNF836Q6ZNA1 936 aa15.02■□□□□ -0
IRF1-211ENST00000613424 CALHM3Q86XJ0 350 aa15.02■□□□□ -0
IRF1-211ENST00000613424 ZZZ3Q8IYH5 903 aa15.02■□□□□ -0
IRF1-211ENST00000613424 PM20D2Q8IYS1 436 aa15.02■□□□□ -0
IRF1-211ENST00000613424 ULK2Q8IYT8 1036 aa15.02■□□□□ -0
IRF1-211ENST00000613424 GTPBP8Q8N3Z3 284 aaPredicted RBP15.02■□□□□ -0
IRF1-211ENST00000613424 C11orf65Q8NCR3 313 aa15.02■□□□□ -0
IRF1-211ENST00000613424 HIPK4Q8NE63 616 aa15.02■□□□□ -0
IRF1-211ENST00000613424 POC1BQ8TC44 478 aa15.02■□□□□ -0
IRF1-211ENST00000613424 ZNF583Q96ND8 569 aa15.02■□□□□ -0
IRF1-211ENST00000613424 HOPXQ9BPY8 73 aaPredicted RBP15.02■□□□□ -0
IRF1-211ENST00000613424 VKORC1Q9BQB6 163 aa15.02■□□□□ -0
IRF1-211ENST00000613424 EXOSC3Q9NQT5 275 aaKnown RBP15.02■□□□□ -0
IRF1-211ENST00000613424 RLIMQ9NVW2 624 aa15.02■□□□□ -0
IRF1-211ENST00000613424 DNAJB12Q9NXW2 375 aaKnown RBP15.02■□□□□ -0
IRF1-211ENST00000613424 CHST2Q9Y4C5 530 aa15.02■□□□□ -0
IRF1-211ENST00000613424 C7orf72A4D263 438 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 FIGNL2A6NMB9 653 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 AHRRA9YTQ3 701 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 WDR1O75083 606 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 PEPDP12955 493 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 GABRA1P14867 456 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 ZNF17P17021 662 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 PRKCAP17252 672 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 PGCP20142 388 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 PSMA4P25789 261 aaKnown RBP15.01□□□□□ -0.01
IRF1-211ENST00000613424 ACVR2AP27037 513 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 RYKP34925 604 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 EIF1P41567 113 aaKnown RBP15.01□□□□□ -0.01
IRF1-211ENST00000613424 NUDT2P50583 147 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 SRYQ05066 204 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 QPRTQ15274 297 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 BCL2A1Q16548 175 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 FAM91A1Q658Y4 838 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 RTL6Q6ICC9 239 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 C8orf82Q6P1X6 216 aaPredicted RBP15.01□□□□□ -0.01
IRF1-211ENST00000613424 HACD2Q6Y1H2 254 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 EID3Q8N140 333 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 CLIP4Q8N3C7 705 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 RPRMLQ8N4K4 120 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 FITM2Q8N6M3 262 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 FBXO27Q8NI29 283 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 BCAS4Q8TDM0 211 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 RNF145Q96MT1 663 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 DMRTA2Q96SC8 542 aa15.01□□□□□ -0.01
IRF1-211ENST00000613424 SPATA9Q9BWV2 254 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms