RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 PTCHD1Q96NR3 888 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 GINS4Q9BRT9 223 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 TBL1XR1Q9BZK7 514 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 PIGUQ9H490 435 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 ANKRD19PQ9H560 264 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 SIRT3Q9NTG7 399 aaPredicted RBP8.09□□□□□ -1.11
LIG4-204ENST00000611712 NPAP1Q9NZP6 1156 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 GRHPRQ9UBQ7 328 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 ASB4Q9Y574 426 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 ATG2BQ96BY7 2078 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 CKAP5Q14008 2032 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 A0A0A6YYC8 382 aaPredicted RBP8.09□□□□□ -1.11
LIG4-204ENST00000611712 CENPBD1B2RD01 187 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 I3L1I5 382 aaPredicted RBP8.09□□□□□ -1.11
LIG4-204ENST00000611712 KLHL18O94889 574 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 UGT2B7P16662 529 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 ITGB8P26012 769 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 HHEXQ03014 270 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 TMEM240Q5SV17 173 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 PRAMEF8Q5VWM4 474 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 PRAMEF7Q5VXH5 474 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 Q6ZSR6 202 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 DGLUCYQ7Z3D6 616 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 SIX5Q8N196 739 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 OR6N2Q8NGY6 317 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 THAP4Q8WY91 577 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 SLC35B4Q969S0 331 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 FYTTD1Q96QD9 318 aaKnown RBP8.09□□□□□ -1.11
LIG4-204ENST00000611712 CTRCQ99895 268 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 SLC38A1Q9H2H9 487 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 TRPM6Q9BX84 2022 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 CEP290O15078 2479 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 LOC105369274A0A096LPK9 316 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 TEX13CA0A0J9YWL9 993 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 ZC3H12DA2A288 527 aaKnown RBP8.09□□□□□ -1.11
LIG4-204ENST00000611712 POM121BA6NF01 834 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 OR5K4A6NMS3 321 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 FUT1P19526 365 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 CRYBB2P43320 205 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 TSFMP43897 325 aaKnown RBP8.09□□□□□ -1.11
LIG4-204ENST00000611712 ZNF81P51508 661 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 ARFIP1P53367 373 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 GMFBP60983 142 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 MESP2Q0VG99 397 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 TPBGQ13641 420 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 CRMP1Q14194 572 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 NFATC4Q14934 902 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 SFRP4Q6FHJ7 346 aaPredicted RBP8.09□□□□□ -1.11
LIG4-204ENST00000611712 LIN54Q6MZP7 749 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 ZNF322Q6U7Q0 402 aaPredicted RBP8.09□□□□□ -1.11
LIG4-204ENST00000611712 METAP1DQ6UB28 335 aaPredicted RBP8.09□□□□□ -1.11
LIG4-204ENST00000611712 ZNF836Q6ZNA1 936 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 ZNF620Q6ZNG0 422 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 LRRC28Q86X40 367 aaPredicted RBP8.09□□□□□ -1.11
LIG4-204ENST00000611712 OR4N4Q8N0Y3 316 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 BBS1Q8NFJ9 593 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 OR52N1Q8NH53 320 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 SLC7A6Q92536 515 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 NSMAFQ92636 917 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 KLHDC7BQ96G42 594 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 TNFRSF13CQ96RJ3 184 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 SRRQ9GZT4 340 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 NANSQ9NR45 359 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 INIPQ9NRY2 104 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 KCMF1Q9P0J7 381 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 LAMP5Q9UJQ1 280 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 ALG5Q9Y673 324 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 PATJQ8NI35 1801 aa8.09□□□□□ -1.11
LIG4-204ENST00000611712 H0YC42 278 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 SSX4O60224 188 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 CD2P06729 351 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 H2AFB2P0C5Z0 115 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 PSMB10P40306 273 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 ETV6P41212 452 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 GDI2P50395 445 aaKnown RBP8.08□□□□□ -1.12
LIG4-204ENST00000611712 TAF13Q15543 124 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 AGBL4Q5VU57 503 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 SLC25A25Q6KCM7 469 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 ANKRD54Q6NXT1 300 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 RNF113BQ8IZP6 322 aaKnown RBP8.08□□□□□ -1.12
LIG4-204ENST00000611712 DEFB119Q8N690 84 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 OR4D11Q8NGI4 311 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 SUN5Q8TC36 379 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 OR1E3Q8WZA6 343 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 CREB3L1Q96BA8 519 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 HYLS1Q96M11 299 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 PDCD10Q9BUL8 212 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 SLC6A20Q9NP91 592 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 DIABLOQ9NR28 239 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 ZNF224Q9NZL3 707 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 ZNF69Q9UC07 566 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 KCND3Q9UK17 655 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 CYP8B1Q9UNU6 501 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 ENTPD2Q9Y5L3 495 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 PIAS3Q9Y6X2 628 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 H0Y8X5 98 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 TBX19O60806 448 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 CEACAM5P06731 702 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 CHRNB1P11230 501 aa8.08□□□□□ -1.12
LIG4-204ENST00000611712 HOXB3P14651 431 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms