RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 PLAURQ03405 335 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 GTDC1Q4AE62 458 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 PDCD4Q53EL6 469 aaKnown RBP11.03□□□□□ -0.64
CTSA-210ENST00000606000 COX20Q5RI15 118 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 FRRS1Q6ZNA5 592 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 MTERF4Q7Z6M4 381 aaKnown RBP11.03□□□□□ -0.64
CTSA-210ENST00000606000 RNF130Q86XS8 419 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 ATP6V1C2Q8NEY4 427 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 VPS37AQ8NEZ2 397 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 PIWIL2Q8TC59 973 aaKnown RBP11.03□□□□□ -0.64
CTSA-210ENST00000606000 GPR119Q8TDV5 335 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 XAGE5Q8WWM1 108 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 ROPN1LQ96C74 230 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 NEURL3Q96EH8 262 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 PANX1Q96RD7 426 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 HOXD1Q9GZZ0 328 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 DNAJB12Q9NXW2 375 aaKnown RBP11.03□□□□□ -0.64
CTSA-210ENST00000606000 BTNL2Q9UIR0 455 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 METRNQ9UJH8 293 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 DCHS2Q6V1P9 2916 aa11.03□□□□□ -0.64
CTSA-210ENST00000606000 TUBAL3A6NHL2 446 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 CCDC154A6NI56 674 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 DUXAA6NLW8 204 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 CLDN24A6NM45 220 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 A6NNC1 897 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 SLCO1B7G3V0H7 640 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 H3BNH8 94 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 HMGN4O00479 90 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 ZNF264O43296 627 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 KIAA0513O60268 411 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 DIAPH2O60879 1101 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 CGAP01215 116 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 UBTFL6P0CB48 400 aaPredicted RBP11.02□□□□□ -0.65
CTSA-210ENST00000606000 PRKCAP17252 672 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 CCKARP32238 428 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 RAC1P63000 192 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 FAM27E3Q08E93 113 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 SKP2Q13309 424 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 QPRTQ15274 297 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 POU4F3Q15319 338 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 GUSBP1Q15486 140 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 ZNF141Q15928 474 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 SYPL1Q16563 259 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 OR2A2Q6IF42 318 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 ZNF474Q6S9Z5 364 aaPredicted RBP11.02□□□□□ -0.65
CTSA-210ENST00000606000 LILRA2Q8N149 483 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 ANKFN1Q8N957 763 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 OR2V1Q8NHB1 315 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 ZG16BQ96DA0 208 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 LRRC46Q96FV0 321 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 KLHL15Q96M94 604 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 EBF4Q9BQW3 602 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 POLDIP3Q9BY77 421 aaKnown RBP11.02□□□□□ -0.65
CTSA-210ENST00000606000 SRXN1Q9BYN0 137 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 NMUR2Q9GZQ4 415 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 ACBD3Q9H3P7 528 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 PIGMQ9H3S5 423 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 EXD2Q9NVH0 621 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 FOXD3Q9UJU5 478 aaPredicted RBP11.02□□□□□ -0.65
CTSA-210ENST00000606000 ZNF175Q9Y473 711 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 WDR45Q9Y484 360 aa11.02□□□□□ -0.65
CTSA-210ENST00000606000 CENPEQ02224 2701 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 SLC22A3O75751 556 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 H6PDO95479 791 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 NTN1O95631 604 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 AK1P00568 194 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 CSTAP01040 98 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 CHRM4P08173 479 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 IDO1P14902 403 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 KLK2P20151 261 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 CAPN3P20807 821 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 SUMO3P55854 103 aaPredicted RBP11.01□□□□□ -0.65
CTSA-210ENST00000606000 SORDQ00796 357 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 CHRNEQ04844 493 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 FGFBP1Q14512 234 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 TIGD2Q4W5G0 525 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 GPAT3Q53EU6 434 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 ATAD3BQ5T9A4 648 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 HBMQ6B0K9 141 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 EPGNQ6UW88 154 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 ZNF621Q6ZSS3 439 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 KIF18BQ86Y91 864 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 ZNF619Q8N2I2 560 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 ZNF610Q8N9Z0 462 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 OR5W2Q8NH69 310 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 LRRC8CQ8TDW0 803 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 FAM222BQ8WU58 562 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 ROBO4Q8WZ75 1007 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 VPS33AQ96AX1 596 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 AURKBQ96GD4 344 aaPredicted RBP11.01□□□□□ -0.65
CTSA-210ENST00000606000 C7orf26Q96N11 449 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 ZBTB18Q99592 522 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 THUMPD3Q9BV44 507 aaKnown RBP11.01□□□□□ -0.65
CTSA-210ENST00000606000 PRRG4Q9BZD6 226 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 CLEC4MQ9H2X3 399 aaPredicted RBP11.01□□□□□ -0.65
CTSA-210ENST00000606000 COQ10BQ9H8M1 238 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 SLC24A3Q9HC58 644 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 SDR39U1Q9NRG7 319 aaPredicted RBP11.01□□□□□ -0.65
CTSA-210ENST00000606000 RASSF1Q9NS23 344 aa11.01□□□□□ -0.65
CTSA-210ENST00000606000 IGHV3-15A0A0B4J1V0 119 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms