RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ABI3Q9P2A4 366 aa20.67■□□□□ 0.9
IRF3-228ENST00000601291 RPS6KB2Q9UBS0 482 aa20.67■□□□□ 0.9
IRF3-228ENST00000601291 NTNG1Q9Y2I2 539 aa20.67■□□□□ 0.9
IRF3-228ENST00000601291 FAAHO00519 579 aa20.66■□□□□ 0.9
IRF3-228ENST00000601291 NKX2-8O15522 239 aa20.66■□□□□ 0.9
IRF3-228ENST00000601291 LINGO3P0C6S8 592 aa20.66■□□□□ 0.9
IRF3-228ENST00000601291 PRKAR1AP10644 381 aa20.66■□□□□ 0.9
IRF3-228ENST00000601291 PRKACGP22612 351 aa20.66■□□□□ 0.9
IRF3-228ENST00000601291 LSMEM1Q8N8F7 131 aa20.66■□□□□ 0.9
IRF3-228ENST00000601291 SLC38A4Q969I6 547 aa20.66■□□□□ 0.9
IRF3-228ENST00000601291 SH3YL1Q96HL8 342 aaPredicted RBP20.66■□□□□ 0.9
IRF3-228ENST00000601291 RTN4RQ9BZR6 473 aa20.66■□□□□ 0.9
IRF3-228ENST00000601291 SDHAF3Q9NRP4 125 aa20.66■□□□□ 0.9
IRF3-228ENST00000601291 MAN2C1Q9NTJ4 1040 aa20.66■□□□□ 0.9
IRF3-228ENST00000601291 EXPH5Q8NEV8 1989 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 TRBV4-1A0A0J9YWV2 114 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 ARRDC5A6NEK1 342 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 ARGFXA6NJG6 315 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 ALPLP05186 524 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 PPP2R2BQ00005 443 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 C17orf67Q0P5P2 114 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 ABHD17BQ5VST6 288 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 CBLN3Q6UW01 205 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 GDF7Q7Z4P5 450 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 GPALPP1Q8IXQ4 340 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 LINC00471Q8N535 108 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 ATG16L2Q8NAA4 619 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 ZNF597Q96LX8 424 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 BARD1Q99728 777 aaKnown RBP20.65■□□□□ 0.9
IRF3-228ENST00000601291 SELENONQ9NZV5 590 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 SLC7A7Q9UM01 511 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 ORC6Q9Y5N6 252 aa20.65■□□□□ 0.9
IRF3-228ENST00000601291 CHCHD2Q9Y6H1 151 aaPredicted RBP20.65■□□□□ 0.9
IRF3-228ENST00000601291 OIP5O43482 229 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 ADAM11O75078 769 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 ANXA8P13928 327 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 P2RX1P51575 399 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 CDC20Q12834 499 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 SNTA1Q13424 505 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 TMEM81Q6P7N7 255 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 CADM2Q8N3J6 435 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 SLC7A13Q8TCU3 470 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 FAM122AQ96E09 287 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 SGCZQ96LD1 299 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 PSD2Q9BQI7 771 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 OSBPL11Q9BXB4 747 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 SMURF2Q9HAU4 748 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 SMPD3Q9NY59 655 aaPredicted RBP20.64■□□□□ 0.9
IRF3-228ENST00000601291 POLHQ9Y253 713 aa20.64■□□□□ 0.9
IRF3-228ENST00000601291 A0A0B4J2E0 115 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 A0A1B0GX12 115 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 FUT4P22083 530 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 CBFBQ13951 182 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 RTL4Q6ZR62 310 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 BEST3Q8N1M1 668 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 GALNT16Q8N428 558 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 B4GALNT2Q8NHY0 566 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 RNF217Q8TC41 542 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 DUSP19Q8WTR2 217 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 DPH1Q9BZG8 443 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 GALNT9Q9HCQ5 603 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 STMN3Q9NZ72 180 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 PPP4R1LQ9P1A2 415 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 WIF1Q9Y5W5 379 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 A0A1B0GWA3 101 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 SH3PXD2BA1X283 911 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 KLK10O43240 276 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 OR10H3O60404 316 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 WT1P19544 449 aaPredicted RBP20.63■□□□□ 0.89
IRF3-228ENST00000601291 PGCP20142 388 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 IGFBP5P24593 272 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 ITPKBP27987 946 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 CASRP41180 1078 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 CASP3P42574 277 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 WBP2NLQ6ICG8 309 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 FAHD1Q6P587 224 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 PODNL1Q6PEZ8 512 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 ULK3Q6PHR2 472 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 RRM2BQ7LG56 351 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 CYP4Z2PQ8N1L4 340 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 OR5W2Q8NH69 310 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 ZNF563Q8TA94 476 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 SNIP1Q8TAD8 396 aaKnown RBP20.63■□□□□ 0.89
IRF3-228ENST00000601291 PAQR8Q8TEZ7 354 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 ARSGQ96EG1 525 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 RDH12Q96NR8 316 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 FUZQ9BT04 418 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 ZNF556Q9HAH1 456 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 ICAM5Q9UMF0 924 aa20.63■□□□□ 0.89
IRF3-228ENST00000601291 CHP2O43745 196 aa20.62■□□□□ 0.89
IRF3-228ENST00000601291 NUDT14O95848 222 aa20.62■□□□□ 0.89
IRF3-228ENST00000601291 THY1P04216 161 aa20.62■□□□□ 0.89
IRF3-228ENST00000601291 CYB561P49447 251 aa20.62■□□□□ 0.89
IRF3-228ENST00000601291 ST13P50502 369 aaKnown RBP20.62■□□□□ 0.89
IRF3-228ENST00000601291 HLCSP50747 726 aa20.62■□□□□ 0.89
IRF3-228ENST00000601291 RAD23AP54725 363 aa20.62■□□□□ 0.89
IRF3-228ENST00000601291 GAS1P54826 345 aa20.62■□□□□ 0.89
IRF3-228ENST00000601291 SUMO3P55854 103 aaPredicted RBP20.62■□□□□ 0.89
IRF3-228ENST00000601291 SOX8P57073 446 aa20.62■□□□□ 0.89
IRF3-228ENST00000601291 SEC23BQ15437 767 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms