RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 GUSBP08236 651 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 NID1P14543 1247 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 FOSL1P15407 271 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 CD53P19397 219 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 CCKARP32238 428 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 SOAT1P35610 550 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 ADAM8P78325 824 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 STX3Q13277 289 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 DPY19L1Q2PZI1 675 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 ARHGAP11BQ3KRB8 267 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 SLC25A53Q5H9E4 307 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 CEP85LQ5SZL2 805 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 ANXA8L1Q5VT79 327 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 AP1ARQ63HQ0 302 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 BEND4Q6ZU67 534 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 TOR1AIP2Q8NFQ8 470 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 OR5W2Q8NH69 310 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 FBXO27Q8NI29 283 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 MIPOL1Q8TD10 442 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 OIT3Q8WWZ8 545 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 CPNE4Q96A23 557 aaPredicted RBP14.14□□□□□ -0.15
VRK3-221ENST00000600284 REXO5Q96IC2 774 aaKnown RBP14.14□□□□□ -0.15
VRK3-221ENST00000600284 MRGPRX4Q96LA9 322 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 SORT1Q99523 831 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 KLHDC3Q9BQ90 382 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 DPY30Q9C005 99 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 OR10A4Q9H209 315 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 GP6Q9HCN6 339 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 EXD2Q9NVH0 621 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 ZNF469Q96JG9 3925 aaPredicted RBP14.14□□□□□ -0.15
VRK3-221ENST00000600284 NUP214P35658 2090 aaPredicted RBP14.13□□□□□ -0.15
VRK3-221ENST00000600284 NPIPA5A0A0B4J1W7 369 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 NPIPA7E9PJI5 369 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 ETV2O00321 342 aaPredicted RBP14.13□□□□□ -0.15
VRK3-221ENST00000600284 ZNF264O43296 627 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 EFNA2O43921 213 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 SCN2BO60939 215 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 OPN1LWP04000 364 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 NPIPA8P0DM63 369 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 PRKCAP17252 672 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 LBPP18428 481 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 HOXC12P31275 282 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 FOXF1Q12946 379 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 CBFBQ13951 182 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 RNPS1Q15287 305 aaKnown RBP14.13□□□□□ -0.15
VRK3-221ENST00000600284 ZNF141Q15928 474 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 STK32CQ86UX6 486 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 CLECL1Q8IZS7 167 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 OR5D16Q8NGK9 328 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 ARL8AQ96BM9 186 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 MARK4Q96L34 752 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 PPP1R36Q96LQ0 422 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 PIP5K1AQ99755 562 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 KLHL4Q9C0H6 718 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 TMEM185BQ9H7F4 350 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 MEAF6Q9HAF1 191 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 KCNK9Q9NPC2 374 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 C6orf203Q9P0P8 240 aaPredicted RBP14.13□□□□□ -0.15
VRK3-221ENST00000600284 CLEC4AQ9UMR7 237 aa14.13□□□□□ -0.15
VRK3-221ENST00000600284 C2CD3Q4AC94 2353 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 RNF103-CHMP3A0A140T963 221 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 SERINC4A6NH21 518 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 ANKRD28O15084 1053 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 SIAH2O43255 324 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 OIP5O43482 229 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 DNAJA2O60884 412 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 NTN1O95631 604 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 UBL4AP11441 157 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 BGNP21810 368 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 UQCRC2P22695 453 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 SFTPDP35247 375 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 CLNS1AP54105 237 aaKnown RBP14.12□□□□□ -0.15
VRK3-221ENST00000600284 FOXD4Q12950 439 aaPredicted RBP14.12□□□□□ -0.15
VRK3-221ENST00000600284 MPP2Q14168 576 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 ZNF239Q16600 458 aaKnown RBP14.12□□□□□ -0.15
VRK3-221ENST00000600284 EXOC3L2Q2M3D2 409 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 HEPHL1Q6MZM0 1159 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 STAC2Q6ZMT1 411 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 ZNF614Q8N883 585 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 OR4A15Q8NGL6 344 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 RNF128Q8TEB7 428 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 PIGTQ969N2 578 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 PIK3IP1Q96FE7 263 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 SLC35G5Q96KT7 338 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 ZNF350Q9GZX5 532 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 LAT2Q9GZY6 243 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 CENPHQ9H3R5 247 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 SERHL2Q9H4I8 314 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 POLE3Q9NRF9 147 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 GPR52Q9Y2T5 361 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 ZFHX3Q15911 3703 aa14.12□□□□□ -0.15
VRK3-221ENST00000600284 ESPNB1AK53 854 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 FCMRO60667 390 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 FPR1P21462 350 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 AGTR1P30556 359 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 RPS26P62854 115 aaKnown RBP14.11□□□□□ -0.15
VRK3-221ENST00000600284 PHC1P78364 1004 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 SELENBP1Q13228 472 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 CASP8Q14790 479 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 GPR68Q15743 365 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms