RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MFN2O95140 757 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 CSTAP01040 98 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 UBL4AP11441 157 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 IL7RP16871 459 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 ZNF24P17028 368 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 HTR1EP28566 365 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 SKP2Q13309 424 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 FXNQ16595 210 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 SPATS1Q496A3 300 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 LIN52Q52LA3 116 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 MRPL2Q5T653 305 aaKnown RBP17.13■□□□□ 0.33
CCDC9-205ENST00000600117 RNF220Q5VTB9 566 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 CBLN3Q6UW01 205 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 FAM180AQ6UWF9 173 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 EIF3MQ7L2H7 374 aaKnown RBP17.13■□□□□ 0.33
CCDC9-205ENST00000600117 PATL1Q86TB9 770 aaKnown RBP17.13■□□□□ 0.33
CCDC9-205ENST00000600117 KRT73Q86Y46 540 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 CMIPQ8IY22 773 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 FAM156AQ8NDB6 213 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 CNOT9Q92600 299 aaKnown RBP17.13■□□□□ 0.33
CCDC9-205ENST00000600117 TAMM41Q96BW9 452 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 ZNF607Q96SK3 696 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 DSN1Q9H410 356 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 ZDHHC11Q9H8X9 412 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 HHATLQ9HCP6 504 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 ASF1BQ9NVP2 202 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 ICAM5Q9UMF0 924 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 SLC35A3Q9Y2D2 325 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 CARD8Q9Y2G2 431 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 IFT52Q9Y366 437 aa17.13■□□□□ 0.33
CCDC9-205ENST00000600117 ACOT7O00154 380 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 GTPBP1O00178 669 aaKnown RBP17.12■□□□□ 0.33
CCDC9-205ENST00000600117 EBAG9O00559 213 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 ZNF264O43296 627 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 HCRTR2O43614 444 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 EIF4E2O60573 245 aaKnown RBP17.12■□□□□ 0.33
CCDC9-205ENST00000600117 CBR3O75828 277 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 ATP5HO75947 161 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 PDE9AO76083 593 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 EPPINO95925 133 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 CRYABP02511 175 aaKnown RBP17.12■□□□□ 0.33
CCDC9-205ENST00000600117 OPN1SWP03999 348 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 PRF1P14222 555 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 ENDOUP21128 410 aaKnown RBP17.12■□□□□ 0.33
CCDC9-205ENST00000600117 MST1P26927 711 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 MAGEA5P43359 124 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 GABPB1Q06547 395 aaPredicted RBP17.12■□□□□ 0.33
CCDC9-205ENST00000600117 DMTNQ08495 405 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 ELOAQ14241 798 aaKnown RBP17.12■□□□□ 0.33
CCDC9-205ENST00000600117 LARS2Q15031 903 aaKnown RBP17.12■□□□□ 0.33
CCDC9-205ENST00000600117 ZNF311Q5JNZ3 666 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 DHRS4L2Q6PKH6 230 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 COMTD1Q86VU5 262 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 SLC22A16Q86VW1 577 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 ARHGAP24Q8N264 748 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 CLIP4Q8N3C7 705 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 FAM109AQ8N4B1 249 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 OR4K17Q8NGC6 315 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 B4GALNT2Q8NHY0 566 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 FAR1Q8WVX9 515 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 SH3YL1Q96HL8 342 aaPredicted RBP17.12■□□□□ 0.33
CCDC9-205ENST00000600117 BTBD10Q9BSF8 475 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 SPATA5L1Q9BVQ7 753 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 LAT2Q9GZY6 243 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 QPCTLQ9NXS2 382 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 DNAJB12Q9NXW2 375 aaKnown RBP17.12■□□□□ 0.33
CCDC9-205ENST00000600117 PRPF19Q9UMS4 504 aaKnown RBP17.12■□□□□ 0.33
CCDC9-205ENST00000600117 SVILO95425 2214 aa17.12■□□□□ 0.33
CCDC9-205ENST00000600117 CDHR4A6H8M9 788 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 CXCR6O00574 342 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 GYG2O15488 501 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 TPST1O60507 370 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 SERPINB7O75635 380 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 CELA3AP09093 270 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 GGT1P19440 569 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 CD247P20963 164 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 MSX1P28360 303 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 PRKAR1BP31321 381 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 KDELR2P33947 212 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 NCALDP61601 193 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 ALDH6A1Q02252 535 aaKnown RBP17.11■□□□□ 0.33
CCDC9-205ENST00000600117 DNAL1Q4LDG9 190 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 CMPK2Q5EBM0 449 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 ARMC8Q8IUR7 673 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 GPR32P1Q8NGA4 272 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 NR4A3Q92570 626 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 RLIMQ9NVW2 624 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 B4GALT7Q9UBV7 327 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 SEC14L3Q9UDX4 400 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 EGFL7Q9UHF1 273 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 ZNF232Q9UNY5 417 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 HEATR5AQ86XA9 2040 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 ZGRF1Q86YA3 2104 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 MED13LQ71F56 2210 aa17.11■□□□□ 0.33
CCDC9-205ENST00000600117 TMEM229AB2RXF0 380 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 TFECO14948 347 aaPredicted RBP17.1■□□□□ 0.33
CCDC9-205ENST00000600117 ADAM11O75078 769 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 UBTFL6P0CB48 400 aaPredicted RBP17.1■□□□□ 0.33
CCDC9-205ENST00000600117 NCK1P16333 377 aa17.1■□□□□ 0.33
CCDC9-205ENST00000600117 TCN1P20061 433 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms