RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 PIGUQ9H490 435 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 HEATR1Q9H583 2144 aaKnown RBP18.81■□□□□ 0.6
PNKP-212ENST00000599454 LIPT1Q9Y234 373 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 FBN1P35555 2871 aaKnown RBP18.81■□□□□ 0.6
PNKP-212ENST00000599454 YLPM1P49750 1951 aaKnown RBP18.81■□□□□ 0.6
PNKP-212ENST00000599454 AZIN1O14977 448 aa18.8■□□□□ 0.6
PNKP-212ENST00000599454 PLIN3O60664 434 aa18.8■□□□□ 0.6
PNKP-212ENST00000599454 THBS1P07996 1170 aa18.8■□□□□ 0.6
PNKP-212ENST00000599454 ATP6V1C1P21283 382 aa18.8■□□□□ 0.6
PNKP-212ENST00000599454 P2RX1P51575 399 aa18.8■□□□□ 0.6
PNKP-212ENST00000599454 ITGADQ13349 1161 aa18.8■□□□□ 0.6
PNKP-212ENST00000599454 LRIG3Q6UXM1 1119 aa18.8■□□□□ 0.6
PNKP-212ENST00000599454 Q6ZSR9 355 aa18.8■□□□□ 0.6
PNKP-212ENST00000599454 FBXO27Q8NI29 283 aa18.8■□□□□ 0.6
PNKP-212ENST00000599454 FAM120BQ96EK7 910 aaKnown RBP18.8■□□□□ 0.6
PNKP-212ENST00000599454 KLHDC3Q9BQ90 382 aa18.8■□□□□ 0.6
PNKP-212ENST00000599454 GRIP2Q9C0E4 1043 aa18.8■□□□□ 0.6
PNKP-212ENST00000599454 BARX1Q9HBU1 254 aaPredicted RBP18.8■□□□□ 0.6
PNKP-212ENST00000599454 ZCCHC3Q9NUD5 404 aaKnown RBP18.8■□□□□ 0.6
PNKP-212ENST00000599454 MAGED1Q9Y5V3 778 aaPredicted RBP18.8■□□□□ 0.6
PNKP-212ENST00000599454 PTGDR2Q9Y5Y4 395 aa18.8■□□□□ 0.6
PNKP-212ENST00000599454 A0A1W2PPM1 405 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 CD5LO43866 347 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 NUDT14O95848 222 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 CHEK2O96017 543 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 ADAP00813 363 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 HMGN2P05204 90 aaKnown RBP18.79■□□□□ 0.6
PNKP-212ENST00000599454 CPA3P15088 417 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 CRHR1P34998 444 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 RPL38P63173 70 aaKnown RBP18.79■□□□□ 0.6
PNKP-212ENST00000599454 TSC22D1Q15714 1073 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 TMEM176BQ3YBM2 270 aaPredicted RBP18.79■□□□□ 0.6
PNKP-212ENST00000599454 LIPMQ5VYY2 423 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 PODNL1Q6PEZ8 512 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 BHLHA15Q7RTS1 189 aaPredicted RBP18.79■□□□□ 0.6
PNKP-212ENST00000599454 CCDC63Q8NA47 563 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 MAPK1IP1LQ8NDC0 245 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 OR2T11Q8NH01 316 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 ZFP90Q8TF47 636 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 MRGPRX4Q96LA9 322 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 TRMOQ9BU70 441 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 BCO1Q9HAY6 547 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 FAIMQ9NVQ4 179 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 KLHL9Q9P2J3 617 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 ICAM5Q9UMF0 924 aa18.79■□□□□ 0.6
PNKP-212ENST00000599454 EFNA2O43921 213 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 IFNA2P01563 188 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 KRT16P08779 473 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 ACVR1BP36896 505 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 HPCAL1P37235 193 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 CDKN1AP38936 164 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 RPL3P39023 403 aaKnown RBP18.78■□□□□ 0.6
PNKP-212ENST00000599454 RAC3P60763 192 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 BSPH1Q075Z2 132 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 SELENBP1Q13228 472 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 LASP1Q14847 261 aaKnown RBP18.78■□□□□ 0.6
PNKP-212ENST00000599454 RFTN2Q52LD8 501 aaPredicted RBP18.78■□□□□ 0.6
PNKP-212ENST00000599454 KLHL26Q53HC5 615 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 CDC73Q6P1J9 531 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 SEZ6L2Q6UXD5 910 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 DNM1P46Q6ZS02 220 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 Q6ZT83 130 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 CLHC1Q8NHS4 586 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 CDS1Q92903 461 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 OTUB1Q96FW1 271 aaPredicted RBP18.78■□□□□ 0.6
PNKP-212ENST00000599454 CHMP6Q96FZ7 201 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 TXLNGYQ9BZA5 131 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 TRIM2Q9C040 744 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 ALG2Q9H553 416 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 COQ10BQ9H8M1 238 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 SIRT3Q9NTG7 399 aaPredicted RBP18.78■□□□□ 0.6
PNKP-212ENST00000599454 BAIAP2L1Q9UHR4 511 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 MID2Q9UJV3 735 aa18.78■□□□□ 0.6
PNKP-212ENST00000599454 DPRXA6NFQ7 191 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 LSM1O15116 133 aaKnown RBP18.77■□□□□ 0.6
PNKP-212ENST00000599454 IGHV4-39P01824 125 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 PRKCAP17252 672 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 OR3A2P47893 321 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 PGGHGQ32M88 737 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 HMBOX1Q6NT76 420 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 CBLN3Q6UW01 205 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 HIPK1Q86Z02 1210 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 ZNF619Q8N2I2 560 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 KBTBD8Q8NFY9 601 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 GPR119Q8TDV5 335 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 NEUROG1Q92886 237 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 ARL8AQ96BM9 186 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 HS6ST2Q96MM7 605 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 TRAF4Q9BUZ4 470 aaPredicted RBP18.77■□□□□ 0.6
PNKP-212ENST00000599454 ACTRT3Q9BYD9 372 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 ATP6V1HQ9UI12 483 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 CARD8Q9Y2G2 431 aa18.77■□□□□ 0.6
PNKP-212ENST00000599454 ANK3Q12955 4377 aaKnown RBP18.76■□□□□ 0.59
PNKP-212ENST00000599454 TMEM114B3SHH9 223 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 ZNF814B7Z6K7 855 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 GTPBP1O00178 669 aaKnown RBP18.76■□□□□ 0.59
PNKP-212ENST00000599454 NTN1O95631 604 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 SLC7A1P30825 629 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 ATP12AP54707 1039 aa18.76■□□□□ 0.59
PNKP-212ENST00000599454 FAPQ12884 760 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms