RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 BCAS1O75363 584 aaPredicted RBP11.68□□□□□ -0.54
LIG1-212ENST00000596549 UGT2B17O75795 530 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 GOSR1O95249 250 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 TUBBP07437 444 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 UBL4AP11441 157 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 POU2F1P14859 743 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 CD1EP15812 388 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 PRKCAP17252 672 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 EPHA3P29320 983 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 SFTPDP35247 375 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 PCYT1AP49585 367 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 NME5P56597 212 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 UFM1P61960 85 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 SKP2Q13309 424 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 ZNF141Q15928 474 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 ZNF239Q16600 458 aaKnown RBP11.68□□□□□ -0.54
LIG1-212ENST00000596549 DPY19L1Q2PZI1 675 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 ARHGAP11BQ3KRB8 267 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 FAM174BQ3ZCQ3 159 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 BEND6Q5SZJ8 279 aaPredicted RBP11.68□□□□□ -0.54
LIG1-212ENST00000596549 HHATQ5VTY9 493 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 BHLHB9Q6PI77 547 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 C22orf34Q6ZV56 151 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 ZNF550Q7Z398 422 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 MAVSQ7Z434 540 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 LSRQ86X29 649 aaPredicted RBP11.68□□□□□ -0.54
LIG1-212ENST00000596549 KIRREL3Q8IZU9 778 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 ZNF610Q8N9Z0 462 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 OR6K3Q8NGY3 331 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 FBXO27Q8NI29 283 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 GPR119Q8TDV5 335 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 RNF128Q8TEB7 428 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 FOXC2Q99958 501 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 NMUR2Q9GZQ4 415 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 HOXD1Q9GZZ0 328 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 WDR55Q9H6Y2 383 aaPredicted RBP11.68□□□□□ -0.54
LIG1-212ENST00000596549 KLHL28Q9NXS3 571 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 MKLN1Q9UL63 735 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 C2CD3Q4AC94 2353 aa11.68□□□□□ -0.54
LIG1-212ENST00000596549 SPG11Q96JI7 2443 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 GOLGA8QA0A0J9YX86 632 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 PRSS51A0A1B0GVH4 220 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 GOLGA8OA6NCC3 632 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 SERINC4A6NH21 518 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 DEFB108AA8MXU0 73 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 GOLGA8NF8WBI6 632 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 ETV2O00321 342 aaPredicted RBP11.67□□□□□ -0.54
LIG1-212ENST00000596549 ZNF264O43296 627 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 ATE1O95260 518 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 CPSF4O95639 269 aaKnown RBP11.67□□□□□ -0.54
LIG1-212ENST00000596549 NUDT14O95848 222 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 AK1P00568 194 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 OR12D1P0DN82 309 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 UQCRC2P22695 453 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 AGTR1P30556 359 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 UGT2B10P36537 528 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 CDKN2CP42773 168 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 CLNS1AP54105 237 aaKnown RBP11.67□□□□□ -0.54
LIG1-212ENST00000596549 MAGOHP61326 146 aaKnown RBP11.67□□□□□ -0.54
LIG1-212ENST00000596549 GPR68Q15743 365 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 MAPK14Q16539 360 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 SLC25A53Q5H9E4 307 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 FBXW10Q5XX13 1052 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 HBMQ6B0K9 141 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 TYW3Q6IPR3 259 aaKnown RBP11.67□□□□□ -0.54
LIG1-212ENST00000596549 TNFAIP8L2Q6P589 184 aaPredicted RBP11.67□□□□□ -0.54
LIG1-212ENST00000596549 LILRA2Q8N149 483 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 TMCO5AQ8N6Q1 288 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 FAM71CQ8NEG0 241 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 RFWD2Q8NHY2 731 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 ABHD3Q8WU67 409 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 RAB8BQ92930 207 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 NEURL3Q96EH8 262 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 GMPPAQ96IJ6 420 aaPredicted RBP11.67□□□□□ -0.54
LIG1-212ENST00000596549 MAELQ96JY0 434 aaKnown RBP11.67□□□□□ -0.54
LIG1-212ENST00000596549 MARK4Q96L34 752 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 CCDC115Q96NT0 180 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 WFIKKN1Q96NZ8 548 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 TMBIM4Q9HC24 238 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 PAQR5Q9NXK6 330 aaPredicted RBP11.67□□□□□ -0.54
LIG1-212ENST00000596549 C6orf203Q9P0P8 240 aaPredicted RBP11.67□□□□□ -0.54
LIG1-212ENST00000596549 MCTS1Q9ULC4 181 aaKnown RBP11.67□□□□□ -0.54
LIG1-212ENST00000596549 PROCRQ9UNN8 238 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 GPR45Q9Y5Y3 372 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 GPC6Q9Y625 555 aaPredicted RBP11.67□□□□□ -0.54
LIG1-212ENST00000596549 AKAP6Q13023 2319 aa11.67□□□□□ -0.54
LIG1-212ENST00000596549 DUXAA6NLW8 204 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 H3BNH8 94 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 HDAC3O15379 428 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 DNAJA2O60884 412 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 STX11O75558 287 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 SOX30O94993 753 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 RAF1P04049 648 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 KITP10721 976 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 ME2P23368 584 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 LOXP28300 417 aaPredicted RBP11.66□□□□□ -0.54
LIG1-212ENST00000596549 ADH6P28332 368 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 EIF1P41567 113 aaKnown RBP11.66□□□□□ -0.54
LIG1-212ENST00000596549 CCR4P51679 360 aa11.66□□□□□ -0.54
LIG1-212ENST00000596549 SLC18A1P54219 525 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms