RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 TTKP33981 857 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 SERPINB5P36952 375 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 PNLIPRP2P54317 469 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 C2orf80Q0P641 193 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 PRSS53Q2L4Q9 553 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 PDLIM3Q53GG5 364 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 Q6ZSR9 355 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 IKBIPQ70UQ0 350 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 GALNT10Q86SR1 603 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 MARCH3Q86UD3 253 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 SLC44A2Q8IWA5 706 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 OR9A2Q8NGT5 310 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 OR6Y1Q8NGX8 325 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 TWIST2Q8WVJ9 160 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 KAT2AQ92830 837 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 KISS1RQ969F8 398 aaPredicted RBP12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 FCRL1Q96LA6 429 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 GIMAP4Q9NUV9 329 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 C1orf109Q9NX04 203 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 MCTS1Q9ULC4 181 aaKnown RBP12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 SNX8Q9Y5X2 465 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 PLCE1Q9P212 2302 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 TNFSF11O14788 317 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 LSM1O15116 133 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 SEC22BO75396 215 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 VENTXO95231 258 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 SYNGR4O95473 234 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 CHEK2O96017 543 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 FGF4P08620 206 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 GANABQ14697 944 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 P2RY6Q15077 328 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 STK11Q15831 433 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 TMEM44Q2T9K0 475 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 UGT3A2Q3SY77 523 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 TNFAIP8L3Q5GJ75 292 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 SH2D4BQ5SQS7 431 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 CEP85LQ5SZL2 805 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 TFAP2EQ6VUC0 442 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 EXOC3L1Q86VI1 746 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 FAM9CQ8IZT9 166 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 SGMS2Q8NHU3 365 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 AGR3Q8TD06 166 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 ERP27Q96DN0 273 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 ADGRG7Q96K78 797 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 EGLN2Q96KS0 407 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 VSTM2LQ96N03 204 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 SOX7Q9BT81 388 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 PTGES2Q9H7Z7 377 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 SSU72Q9NP77 194 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 MIEF1Q9NQG6 463 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 CBLN4Q9NTU7 201 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 NPAP1Q9NZP6 1156 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 VDAC3Q9Y277 283 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 WBP11Q9Y2W2 641 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 TRAF6Q9Y4K3 522 aa12.16□□□□□ -0.46
SHKBP1-208ENST00000595726 VWFP04275 2813 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 IGHV4-61A0A0C4DH41 118 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 A0A0J9YW62 118 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 MYO1GB0I1T2 1018 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 PIP5K1BO14986 540 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 BCAS2O75934 225 aaPredicted RBP12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 LINC00032P0C843 101 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 APEHP13798 732 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 SDC1P18827 310 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 MPIP34949 423 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 RPL38P63173 70 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 RFTN2Q52LD8 501 aaPredicted RBP12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 BHLHA15Q7RTS1 189 aaPredicted RBP12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 HOMEZQ8IX15 550 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 TUSC5Q8IXB3 177 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 DDIASQ8IXT1 998 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 C3orf56Q8N813 242 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 OR7G2Q8NG99 324 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 ABHD3Q8WU67 409 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 ZBTB9Q96C00 473 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 PKNOX2Q96KN3 472 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 BBS4Q96RK4 519 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 CCT7Q99832 543 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 TMEM185BQ9H7F4 350 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 SDHAF3Q9NRP4 125 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 GLRX2Q9NS18 164 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 TAS2R7Q9NYW3 318 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 OR10H1Q9Y4A9 318 aa12.15□□□□□ -0.46
SHKBP1-208ENST00000595726 PRKDCP78527 4128 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 VWC2LB2RUY7 222 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 ZNF814B7Z6K7 855 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 PLOD3O60568 738 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 LYZL6O75951 148 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 JUNP05412 331 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 SERPINB4P48594 390 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 NCBP2P52298 156 aaKnown RBP eCLIP12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 SPOCK1Q08629 439 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 ITGADQ13349 1161 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 PPA1Q15181 289 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 GALNTL6Q49A17 601 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 GLYR1Q49A26 553 aaPredicted RBP12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 XKR7Q5GH72 579 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 B3GLCTQ6Y288 498 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 MUC15Q8N387 334 aa12.14□□□□□ -0.47
SHKBP1-208ENST00000595726 OSTF1Q92882 214 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms