RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CD8BP10966 210 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 ATP6V1C1P21283 382 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 MATN1P21941 496 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 CCKARP32238 428 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 UGT2B10P36537 528 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 PHC1P78364 1004 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 FGFBP1Q14512 234 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 ACKR1Q16570 336 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 EXOSC6Q5RKV6 272 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 ANKRD46Q86W74 232 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 OR5AK3PQ8NH89 298 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 STON2Q8WXE9 905 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 MARK4Q96L34 752 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 TEX37Q96LM6 180 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 SLC39A3Q9BRY0 314 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 MED18Q9BUE0 208 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 DSN1Q9H410 356 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 RMND5AQ9H871 391 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 RNF122Q9H9V4 155 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 GPATCH2Q9NW75 528 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 ZNF175Q9Y473 711 aa15.78■□□□□ 0.12
SHKBP1-203ENST00000594298 C17orf51A8MQB3 221 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 SCO2O43819 266 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 AK1P00568 194 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 POU2F1P14859 743 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 HPGDP15428 266 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 HK1P19367 917 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 TCEA1P23193 301 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 IL12AP29459 219 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 CHI3L1P36222 383 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 RAET1LQ5VY80 246 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 MSANTD1Q6ZTZ1 278 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 UBQLNLQ8IYU4 475 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 FIG4Q92562 907 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 CDS1Q92903 461 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 PIK3IP1Q96FE7 263 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 ZNF845Q96IR2 970 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 SLC35G5Q96KT7 338 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 PANX1Q96RD7 426 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 HOXD1Q9GZZ0 328 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 OPN3Q9H1Y3 402 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 EXD2Q9NVH0 621 aa15.77■□□□□ 0.12
SHKBP1-203ENST00000594298 FAM234BA2RU67 622 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 C16orf97H3BN30 126 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 EDF1O60869 148 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 LY6G6DO95868 133 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 IGKV1D-16P01601 117 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 NGFRP08138 427 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 MRPL19P49406 292 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 ANXA11P50995 505 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 POLR2JP52435 117 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 SUCLG1P53597 346 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 TXNL4AP83876 142 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 C17orf67Q0P5P2 114 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 GUSBP1Q15486 140 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 GLYR1Q49A26 553 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 FIGNL1Q6PIW4 674 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 C20orf204Q6ZNR8 217 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 CIARTQ8N365 385 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 OR7D2Q96RA2 312 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 CCL19Q99731 98 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 BDH2Q9BUT1 245 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 PTGES2Q9H7Z7 377 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 UBQLN4Q9NRR5 601 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 TMEM45AQ9NWC5 275 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 ZNF337Q9Y3M9 751 aa15.76■□□□□ 0.11
SHKBP1-203ENST00000594298 CCDC154A6NI56 674 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 H0YC42 278 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 SCDO00767 359 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 TBXA2RP21731 343 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 LOXP28300 417 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 TPD52P55327 224 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 GRAMD1BQ3KR37 738 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 DCST2Q5T1A1 773 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 ATAD3BQ5T9A4 648 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 ZNF621Q6ZSS3 439 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 MARCH3Q86UD3 253 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 METTL25Q8N6Q8 603 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 ZNF527Q8NB42 609 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 MIPOL1Q8TD10 442 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 DUSP19Q8WTR2 217 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 NEURL3Q96EH8 262 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 C1GALT1C1Q96EU7 318 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 OTUB1Q96FW1 271 aaPredicted RBP15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 ITCHQ96J02 903 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 EBF4Q9BQW3 602 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 PIGQQ9BRB3 760 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 SLC35A5Q9BS91 424 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 PINK1Q9BXM7 581 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 RTN4RQ9BZR6 473 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 RABEP2Q9H5N1 569 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 UBTD1Q9HAC8 227 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 MED11Q9P086 117 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 TRIM33Q9UPN9 1127 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 AP4B1Q9Y6B7 739 aa15.75■□□□□ 0.11
SHKBP1-203ENST00000594298 IGLV3-32A0A0A0MS00 114 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 OR2M5A3KFT3 312 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 ALG1L2C9J202 215 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 C9JVG2 144 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 H7C1Q1 480 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms