RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 DAPL1A0PJW8 107 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 LINC00862A6NCI5 91 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 PRR19A6NJB7 356 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 B8ZZF3 427 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 EML2O95834 649 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 MRPL3P09001 348 aaKnown RBP15.31■□□□□ 0.04
LIG1-206ENST00000594067 HTR2AP28223 471 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 IGFALSP35858 605 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 EEF1A1P68104 462 aaKnown RBP15.31■□□□□ 0.04
LIG1-206ENST00000594067 TRMT12Q53H54 448 aaKnown RBP15.31■□□□□ 0.04
LIG1-206ENST00000594067 FCRLBQ6BAA4 426 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 GID4Q8IVV7 300 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 SHISA5Q8N114 240 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 ZNF680Q8NEM1 530 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 LCN9Q8WX39 176 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 GAL3ST3Q96A11 431 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 RFT1Q96AA3 541 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 SCMH1Q96GD3 660 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 SDF2Q99470 211 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 GHITMQ9H3K2 345 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 TMEM74BQ9NUR3 256 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 SIDT1Q9NXL6 827 aaKnown RBP15.31■□□□□ 0.04
LIG1-206ENST00000594067 MRPL39Q9NYK5 338 aaKnown RBP15.31■□□□□ 0.04
LIG1-206ENST00000594067 ING4Q9UNL4 249 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 TBC1D3KA0A087X1G2 549 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 C7orf66A4D0T2 115 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 TBC1D3FA6NER0 549 aaPredicted RBP15.31■□□□□ 0.04
LIG1-206ENST00000594067 E9PI62 339 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 MYOGP15173 224 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 MTNR1BP49286 362 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 RPS7P62081 194 aaKnown RBP15.31■□□□□ 0.04
LIG1-206ENST00000594067 TNFRSF17Q02223 184 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 RUNX3Q13761 415 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 ARHGAP11BQ3KRB8 267 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 DEFB134Q4QY38 66 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 TBC1D3GQ6DHY5 549 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 GLRX5Q86SX6 157 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 ASPGQ86U10 573 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 PAQR7Q86WK9 346 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 LRRC28Q86X40 367 aaPredicted RBP15.31■□□□□ 0.04
LIG1-206ENST00000594067 LRRC17Q8N6Y2 441 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 OR11H4Q8NGC9 324 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 OR52L1Q8NGH7 329 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 OR14C36Q8NHC7 312 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 SMAP2Q8WU79 429 aaPredicted RBP15.31■□□□□ 0.04
LIG1-206ENST00000594067 CD180Q99467 661 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 JAM3Q9BX67 310 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 OR51V1Q9H2C8 321 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 KCNN2Q9H2S1 579 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 KRCC1Q9NPI7 259 aaPredicted RBP15.31■□□□□ 0.04
LIG1-206ENST00000594067 FBXO34Q9NWN3 711 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 SLCO1C1Q9NYB5 712 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 GLTPQ9NZD2 209 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 SPEF1Q9Y4P9 236 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 EIF4EP06730 217 aaKnown RBP15.3■□□□□ 0.04
LIG1-206ENST00000594067 C5AR1P21730 350 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 GALP22466 123 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 OR10A3P58181 314 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 OR4K14Q8NGD5 310 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 OR5W2Q8NH69 310 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 BRIX1Q8TDN6 353 aaKnown RBP15.3■□□□□ 0.04
LIG1-206ENST00000594067 HS6ST2Q96MM7 605 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 SLC6A17Q9H1V8 727 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 FGF22Q9HCT0 170 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 ADAP2Q9NPF8 381 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 ENAMQ9NRM1 1142 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 AUP1Q9Y679 476 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 UNC80Q8N2C7 3258 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 TRAPPC13A5PLN9 417 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 BHLHE40O14503 412 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 BMP7P18075 431 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 AHCYP23526 432 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 TEAD1P28347 426 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 RFX3P48380 749 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 RGS1Q08116 209 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 RUNX2Q13950 521 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 OR1Q1Q15612 314 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 PRPF38BQ5VTL8 546 aaKnown RBP15.3■□□□□ 0.04
LIG1-206ENST00000594067 HBMQ6B0K9 141 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 SDE2Q6IQ49 451 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 THSD4Q6ZMP0 1018 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 RANBP3LQ86VV4 465 aaPredicted RBP15.3■□□□□ 0.04
LIG1-206ENST00000594067 ZNF655Q8N720 491 aaPredicted RBP15.3■□□□□ 0.04
LIG1-206ENST00000594067 TMEM239Q8WW34 195 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 APOOQ9BUR5 198 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 SLC17A9Q9BYT1 436 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 HEXA-AS1Q9H8Q6 139 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 TBC1D29Q9UFV1 150 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 ZNF223Q9UK11 482 aaPredicted RBP15.3■□□□□ 0.04
LIG1-206ENST00000594067 TRAV6A0A075B6T7 132 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 ZNF860A6NHJ4 632 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 PEX12O00623 359 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 SLC31A1O15431 190 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 DHFRP00374 187 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 RPS21P63220 83 aaKnown RBP15.3■□□□□ 0.04
LIG1-206ENST00000594067 E2F1Q01094 437 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 BDH1Q02338 343 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 SLC3A1Q07837 685 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 DUSP8Q13202 625 aa15.3■□□□□ 0.04
LIG1-206ENST00000594067 TMEFF1Q8IYR6 380 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms