RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PIGQQ9BRB3 760 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 TMEM120AQ9BXJ8 343 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 UBTD1Q9HAC8 227 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 KLHL28Q9NXS3 571 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 C6orf203Q9P0P8 240 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-226ENST00000591534 MCM8Q9UJA3 840 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 ABCG2Q9UNQ0 655 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 ZNF175Q9Y473 711 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 FLNAP21333 2647 aaKnown RBP8.51□□□□□ -1.05
BRCA1-226ENST00000591534 ACANP16112 2415 aa8.51□□□□□ -1.05
BRCA1-226ENST00000591534 EXPH5Q8NEV8 1989 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 CCT8L1PA6NM43 557 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 NPIPB8E9PQR5 432 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 H7C1Q1 480 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 UBDO15205 165 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 ZIC3O60481 467 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 PLOD3O60568 738 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 TSPAN2O60636 221 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 RSL1D1O76021 490 aaKnown RBP8.5□□□□□ -1.05
BRCA1-226ENST00000591534 TGM6O95932 706 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 KITP10721 976 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 CD8BP10966 210 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 HK1P19367 917 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 UGT2B10P36537 528 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 ASMTP46597 345 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 HTR6P50406 440 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 NR1H2P55055 460 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 MRPS35P82673 323 aaKnown RBP8.5□□□□□ -1.05
BRCA1-226ENST00000591534 ACSM2AQ08AH3 577 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 FAM27E3Q08E93 113 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 STX5Q13190 355 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 KRT72Q14CN4 511 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 SGCBQ16585 318 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 DECR1Q16698 335 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 DPY19L1Q2PZI1 675 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 GLYR1Q49A26 553 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-226ENST00000591534 CYP27C1Q4G0S4 372 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 GLIPR1L2Q4G1C9 344 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 ZNF628Q5EBL2 1059 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 ACSM2BQ68CK6 577 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 NXNQ6DKJ4 435 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 OR5M10Q6IEU7 315 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 PLEKHM3Q6ZWE6 761 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 SLC44A2Q8IWA5 706 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-226ENST00000591534 UBQLNLQ8IYU4 475 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 GLB1L3Q8NCI6 653 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-226ENST00000591534 TWIST2Q8WVJ9 160 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 C10orf82Q8WW14 230 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 TUBGCP3Q96CW5 907 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 CNRIP1Q96F85 164 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-226ENST00000591534 MAELQ96JY0 434 aaKnown RBP8.5□□□□□ -1.05
BRCA1-226ENST00000591534 VSTM2LQ96N03 204 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 ZNF681Q96N22 645 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 BBS4Q96RK4 519 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 KCNA7Q96RP8 456 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 ZBTB18Q99592 522 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 PRPF18Q99633 342 aaKnown RBP8.5□□□□□ -1.05
BRCA1-226ENST00000591534 G6PC3Q9BUM1 346 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 SSBP4Q9BWG4 385 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-226ENST00000591534 PRRG4Q9BZD6 226 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 CXorf56Q9H5V9 222 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 C3orf14Q9HBI5 128 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 TNFRSF12AQ9NP84 129 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 PAQR5Q9NXK6 330 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-226ENST00000591534 ZDHHC2Q9UIJ5 367 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 FBXL2Q9UKC9 423 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 PROCRQ9UNN8 238 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 EMC9Q9Y3B6 208 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 AP4B1Q9Y6B7 739 aa8.5□□□□□ -1.05
BRCA1-226ENST00000591534 HRNRQ86YZ3 2850 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-226ENST00000591534 TTC36A6NLP5 189 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 BBIP1A8MTZ0 92 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 UBFD1O14562 309 aaKnown RBP8.49□□□□□ -1.05
BRCA1-226ENST00000591534 ITM2AO43736 263 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 PCDH7O60245 1069 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 LYPLA1O75608 230 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-226ENST00000591534 LY6G6DO95868 133 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 PLGP00747 810 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-226ENST00000591534 NPPAP01160 153 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 KRT16P08779 473 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 CT45A8P0DMV1 189 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 CT45A9P0DMV2 189 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 PRPS2P11908 318 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 TBXA2RP21731 343 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 CALB2P22676 271 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 PRPH2P23942 346 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 EVI2BP34910 448 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 ADMP35318 185 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 MRPL19P49406 292 aaKnown RBP8.49□□□□□ -1.05
BRCA1-226ENST00000591534 CLNS1AP54105 237 aaKnown RBP8.49□□□□□ -1.05
BRCA1-226ENST00000591534 FOXA1P55317 472 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 SIRPAP78324 504 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 ZNF155Q12901 538 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-226ENST00000591534 SQLEQ14534 574 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 LTB4RQ15722 352 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 CT45A2Q5DJT8 189 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 BEX5Q5H9J7 111 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 FAM180BQ6P0A1 224 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 STK32CQ86UX6 486 aa8.49□□□□□ -1.05
BRCA1-226ENST00000591534 KRTAP1-3Q8IUG1 177 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms