RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 UBE3DQ7Z6J8 389 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 SAMD14Q8IZD0 417 aaPredicted RBP5.39□□□□□ -1.55
VPS25-204ENST00000589577 TAGAPQ8N103 731 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 GABRG1Q8N1C3 465 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 C1orf52Q8N6N3 182 aaKnown RBP5.39□□□□□ -1.55
VPS25-204ENST00000589577 CCDC197Q8NCU1 140 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 WDR20Q8TBZ3 569 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 BCAS4Q8TDM0 211 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 ACTRT2Q8TDY3 377 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 STON2Q8WXE9 905 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 ADIPOR1Q96A54 375 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 FOXN4Q96NZ1 517 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 DGAT2Q96PD7 388 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 ELAC2Q9BQ52 826 aaKnown RBP5.39□□□□□ -1.55
VPS25-204ENST00000589577 CCDC28BQ9BUN5 200 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 TMEM120AQ9BXJ8 343 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 MS4A8Q9BY19 250 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 ACPTQ9BZG2 426 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 BPESC1Q9GZL8 116 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 OR51B5Q9H339 312 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 MEAF6Q9HAF1 191 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 LYRM4Q9HD34 91 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 PRDM7Q9NQW5 492 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 ATAD3AQ9NVI7 634 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 PNPOQ9NVS9 261 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 FAM53CQ9NYF3 392 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 NPAP1Q9NZP6 1156 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 MCM8Q9UJA3 840 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 PSME2Q9UL46 239 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 CLEC4AQ9UMR7 237 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 PCDHB10Q9UN67 800 aa5.39□□□□□ -1.55
VPS25-204ENST00000589577 A0A1W2PS29 197 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 WASHC1A8K0Z3 465 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 CAPN14A8MX76 684 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 E9PBE3 544 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 NDUFS8O00217 210 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 SAP18O00422 153 aaKnown RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 ABCD4O14678 606 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 DYRK3O43781 588 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 SHOX2O60902 331 aaPredicted RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 PRKRAO75569 313 aaKnown RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 NTN1O95631 604 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 FESP07332 822 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 ALOX15P16050 662 aaPredicted RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 HIST1H1TP22492 207 aaPredicted RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 CPN2P22792 545 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 PRPH2P23942 346 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 EPHA3P29320 983 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 TIA1P31483 386 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS25-204ENST00000589577 LIMS1P48059 325 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 TMED10P49755 219 aaKnown RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 HTR6P50406 440 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 SEC24CP53992 1094 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 FOXA1P55317 472 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 TRA2BP62995 288 aaKnown RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 PLIN5Q00G26 463 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 EMX2Q04743 252 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 SNTA1Q13424 505 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 ZNF267Q14586 743 aaPredicted RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 GSTA3Q16772 222 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS25-204ENST00000589577 DPY19L1Q2PZI1 675 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 XKR7Q5GH72 579 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 TCHHL1Q5QJ38 904 aaPredicted RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 METTL21CQ5VZV1 264 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 OR4C11Q6IEV9 310 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 OGFOD2Q6N063 350 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 SLC30A6Q6NXT4 461 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 BEND4Q6ZU67 534 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 IKBIPQ70UQ0 350 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 COMMD6Q7Z4G1 85 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 GALNT12Q8IXK2 581 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 MUC15Q8N387 334 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 METTL4Q8N3J2 472 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 ZCCHC7Q8N3Z6 543 aaKnown RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 SVOPLQ8N434 492 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 ZDHHC22Q8N966 263 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 VPS37AQ8NEZ2 397 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 STEAP2Q8NFT2 490 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 ZNF418Q8TF45 676 aaPredicted RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 THOC1Q96FV9 657 aaKnown RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 ZNF317Q96PQ6 595 aaPredicted RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 F2RL3Q96RI0 385 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 CCT8L2Q96SF2 557 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 PIMREGQ9BSJ6 248 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 MRPL1Q9BYD6 325 aaKnown RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 DPY30Q9C005 99 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 NXF5Q9H1B4 397 aaKnown RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 FOLH1BQ9HBA9 442 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS25-204ENST00000589577 ZNF225Q9UK10 706 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 ARL2BPQ9Y2Y0 163 aa5.38□□□□□ -1.55
VPS25-204ENST00000589577 MRPS18CQ9Y3D5 142 aaKnown RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 POLR3HQ9Y535 204 aaPredicted RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 HEATR1Q9H583 2144 aaKnown RBP5.38□□□□□ -1.55
VPS25-204ENST00000589577 LOC100653049A0A140TA62 436 aa5.37□□□□□ -1.55
VPS25-204ENST00000589577 C1orf226A1L170 272 aa5.37□□□□□ -1.55
VPS25-204ENST00000589577 PRAMEF25A6NGN4 478 aa5.37□□□□□ -1.55
VPS25-204ENST00000589577 NPIPB8E9PQR5 432 aa5.37□□□□□ -1.55
VPS25-204ENST00000589577 RTCAO00442 366 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms