RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 UNC119BA6NIH7 251 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 CDC42EP2O14613 210 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 CTBP2P56545 445 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 DCDP81605 110 aaKnown RBP20.5■□□□□ 0.87
CIRBP-208ENST00000586548 HLA-DQA1Q5Y7H0 255 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 PLAG1Q6DJT9 500 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 BPHLQ86WA6 291 aaPredicted RBP20.5■□□□□ 0.87
CIRBP-208ENST00000586548 PPP1R3BQ86XI6 285 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 C9orf40Q8IXQ3 194 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 CDK20Q8IZL9 346 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 PFN4Q8NHR9 129 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 TMEM163Q8TC26 289 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 GAL3ST4Q96RP7 486 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 ZNF426Q9BUY5 554 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 TO15178 435 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 IFI30P13284 250 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 ZNF91Q05481 1191 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 TRA2AQ13595 282 aaKnown RBP eCLIP20.5■□□□□ 0.87
CIRBP-208ENST00000586548 LPAL2Q16609 132 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 SYT14P1Q58G82 188 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 FNDC7Q5VTL7 733 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 LANCL3Q6ZV70 420 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 TMPRSS11FQ6ZWK6 438 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 SLC29A4Q7RTT9 530 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 FAM71CQ8NEG0 241 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 BRIX1Q8TDN6 353 aaKnown RBP20.5■□□□□ 0.87
CIRBP-208ENST00000586548 CRELD1Q96HD1 420 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 DPH1Q9BZG8 443 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 RPS6KB2Q9UBS0 482 aa20.5■□□□□ 0.87
CIRBP-208ENST00000586548 PRKNO60260 465 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-208ENST00000586548 DBTP11182 482 aaKnown RBP20.49■□□□□ 0.87
CIRBP-208ENST00000586548 MAKP20794 623 aa20.49■□□□□ 0.87
CIRBP-208ENST00000586548 PTNP21246 168 aa20.49■□□□□ 0.87
CIRBP-208ENST00000586548 ALG10BQ5I7T1 473 aa20.49■□□□□ 0.87
CIRBP-208ENST00000586548 CLEC12AQ5QGZ9 265 aa20.49■□□□□ 0.87
CIRBP-208ENST00000586548 ZNF385CQ66K41 422 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-208ENST00000586548 ULK3Q6PHR2 472 aa20.49■□□□□ 0.87
CIRBP-208ENST00000586548 ARSGQ96EG1 525 aa20.49■□□□□ 0.87
CIRBP-208ENST00000586548 RNF31Q96EP0 1072 aa20.49■□□□□ 0.87
CIRBP-208ENST00000586548 LRR1Q96L50 414 aa20.49■□□□□ 0.87
CIRBP-208ENST00000586548 WWTR1Q9GZV5 400 aa20.49■□□□□ 0.87
CIRBP-208ENST00000586548 ASCC3Q8N3C0 2202 aaKnown RBP20.48■□□□□ 0.87
CIRBP-208ENST00000586548 AGRPO00253 132 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 SCDO00767 359 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 GABARAPO95166 117 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 UTS2O95399 124 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 ADORA3P0DMS8 318 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 FGF5P12034 268 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 HPGDP15428 266 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 ROR2Q01974 943 aaKnown RBP20.48■□□□□ 0.87
CIRBP-208ENST00000586548 NFATC3Q12968 1075 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 PGGHGQ32M88 737 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 RPL13AP3Q6NVV1 102 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 KIRREL2Q6UWL6 708 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 PRR23CQ6ZRP0 262 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 SHISA6Q6ZSJ9 500 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 CYP4Z2PQ8N1L4 340 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 OR2T33Q8NG76 320 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 OR4Q3Q8NH05 313 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 BPIFA2Q96DR5 249 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 ZNF582Q96NG8 517 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-208ENST00000586548 DCUN1D5Q9BTE7 237 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 C20orf141Q9NUB4 165 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 MED17Q9NVC6 651 aa20.48■□□□□ 0.87
CIRBP-208ENST00000586548 A0A1W2PPW3 197 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 CNOT3O75175 753 aaKnown RBP20.47■□□□□ 0.87
CIRBP-208ENST00000586548 HEXBP07686 556 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 ZNF883P0CG24 379 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 TBXA2RP21731 343 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 CSTF2P33240 577 aaKnown RBP eCLIP20.47■□□□□ 0.87
CIRBP-208ENST00000586548 MPLP40238 635 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 NCF4Q15080 339 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 NDUFAF6Q330K2 333 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 SLC30A6Q6NXT4 461 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 LINC00114Q6XXX2 140 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 OVCH1Q7RTY7 1134 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 BMP8AQ7Z5Y6 402 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 P2RY8Q86VZ1 359 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 CADM2Q8N3J6 435 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 C17orf47Q8NEP4 570 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 FANK1Q8TC84 345 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 HSPBAP1Q96EW2 488 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 OR52D1Q9H346 318 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 ATP13A2Q9NQ11 1180 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 MEPEQ9NQ76 525 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-208ENST00000586548 EXOSC3Q9NQT5 275 aaKnown RBP20.47■□□□□ 0.87
CIRBP-208ENST00000586548 OCIAD1Q9NX40 245 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 SNTNA6NMZ2 147 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 IDSB3KWA1 339 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 KPNA4O00629 521 aaPredicted RBP20.47■□□□□ 0.87
CIRBP-208ENST00000586548 PSPHP78330 225 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 IL11RAQ14626 422 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 CTF1Q16619 201 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 FAAH2Q6GMR7 532 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 ZNF367Q7RTV3 350 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 BCDIN3DQ7Z5W3 292 aaKnown RBP20.47■□□□□ 0.87
CIRBP-208ENST00000586548 ANKRD37Q7Z713 158 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 ZNF441Q8N8Z8 693 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 OR52L1Q8NGH7 329 aa20.47■□□□□ 0.87
CIRBP-208ENST00000586548 DNAJA4Q8WW22 397 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms