RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 ENPP1P22413 925 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 IL32P24001 234 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 P2RX1P51575 399 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 POU6F2P78424 691 aaPredicted RBP12.83□□□□□ -0.36
SDF2-202ENST00000585428 BSPH1Q075Z2 132 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 FOXF1Q12946 379 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 TOMM34Q15785 309 aaPredicted RBP12.83□□□□□ -0.36
SDF2-202ENST00000585428 CCDC153Q494R4 210 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 CFAP157Q5JU67 520 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 PODNL1Q6PEZ8 512 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 Q6ZT83 130 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 SLC43A2Q8N370 569 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 KISS1RQ969F8 398 aaPredicted RBP12.83□□□□□ -0.36
SDF2-202ENST00000585428 GTPBP3Q969Y2 492 aaKnown RBP12.83□□□□□ -0.36
SDF2-202ENST00000585428 MTERF3Q96E29 417 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 FAM120BQ96EK7 910 aaKnown RBP12.83□□□□□ -0.36
SDF2-202ENST00000585428 OTUB1Q96FW1 271 aaPredicted RBP12.83□□□□□ -0.36
SDF2-202ENST00000585428 TSSK3Q96PN8 268 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 HOXD1Q9GZZ0 328 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 PIGUQ9H490 435 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 BCO1Q9HAY6 547 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 PSMC3IPQ9P2W1 217 aaPredicted RBP12.83□□□□□ -0.36
SDF2-202ENST00000585428 TBK1Q9UHD2 729 aa12.83□□□□□ -0.36
SDF2-202ENST00000585428 GPC6Q9Y625 555 aaPredicted RBP12.83□□□□□ -0.36
SDF2-202ENST00000585428 RTTNQ86VV8 2226 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 ATRQ13535 2644 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 PRR14LQ5THK1 2151 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 A0A1W2PP18 115 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 GJE1A6NN92 205 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 SHISA9B4DS77 424 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 LSM1O15116 133 aaKnown RBP12.82□□□□□ -0.36
SDF2-202ENST00000585428 RAMP1O60894 148 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 ADAM11O75078 769 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 GLRA3O75311 464 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 TP53P04637 393 aaPredicted RBP12.82□□□□□ -0.36
SDF2-202ENST00000585428 HMGN2P05204 90 aaKnown RBP12.82□□□□□ -0.36
SDF2-202ENST00000585428 FESP07332 822 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 FAM153BP0C7A2 387 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 CPA3P15088 417 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 CRHR1P34998 444 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 CCT5P48643 541 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 RAC3P60763 192 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 FAM153CQ494X1 144 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 SLC25A53Q5H9E4 307 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.82□□□□□ -0.36
SDF2-202ENST00000585428 DTX2Q86UW9 622 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 TDRPQ86YL5 185 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 ZNF619Q8N2I2 560 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 COX18Q8N8Q8 333 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 MNS1Q8NEH6 495 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 PHOSPHO1Q8TCT1 267 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 ZNF75CPQ92670 426 aaPredicted RBP12.82□□□□□ -0.36
SDF2-202ENST00000585428 CDS1Q92903 461 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 PSD2Q9BQI7 771 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 TRAF4Q9BUZ4 470 aaPredicted RBP12.82□□□□□ -0.36
SDF2-202ENST00000585428 C12orf65Q9H3J6 166 aaKnown RBP12.82□□□□□ -0.36
SDF2-202ENST00000585428 CXorf36Q9H7Y0 433 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 COQ10BQ9H8M1 238 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 CISD1Q9NZ45 108 aaKnown RBP12.82□□□□□ -0.36
SDF2-202ENST00000585428 ATP6V1HQ9UI12 483 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 GDF2Q9UK05 429 aaPredicted RBP12.82□□□□□ -0.36
SDF2-202ENST00000585428 CARD8Q9Y2G2 431 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 TMED5Q9Y3A6 229 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 DNAJC15Q9Y5T4 150 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 KCNE3Q9Y6H6 103 aa12.82□□□□□ -0.36
SDF2-202ENST00000585428 ANK3Q12955 4377 aaKnown RBP12.81□□□□□ -0.36
SDF2-202ENST00000585428 GOLGA8QA0A0J9YX86 632 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 GOLGA8OA6NCC3 632 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 ESPNB1AK53 854 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 NPIPB9F8W1W9 429 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 GOLGA8NF8WBI6 632 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 ETV2O00321 342 aaPredicted RBP12.81□□□□□ -0.36
SDF2-202ENST00000585428 AZIN1O14977 448 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 PGM3O95394 542 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 IFNA2P01563 188 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 FGF4P08620 206 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 LINC00032P0C843 101 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 BCKDHAP12694 445 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 PRKCAP17252 672 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 EFNA1P20827 205 aaPredicted RBP12.81□□□□□ -0.36
SDF2-202ENST00000585428 OR3A2P47893 321 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 SUMO3P55854 103 aaPredicted RBP12.81□□□□□ -0.36
SDF2-202ENST00000585428 UGT3A2Q3SY77 523 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 BHLHA15Q7RTS1 189 aaPredicted RBP12.81□□□□□ -0.36
SDF2-202ENST00000585428 SZRD1Q7Z422 152 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 BANPQ8N9N5 519 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 KBTBD8Q8NFY9 601 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 OR10H5Q8NGA6 315 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 CLHC1Q8NHS4 586 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 PSMA8Q8TAA3 256 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 MRGPRX4Q96LA9 322 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 POTEKPQ9BYX7 375 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 ANKZF1Q9H8Y5 726 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 L2HGDHQ9H9P8 463 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 YAE1D1Q9NRH1 226 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 ZCCHC3Q9NUD5 404 aaKnown RBP12.81□□□□□ -0.36
SDF2-202ENST00000585428 B3GALT5Q9Y2C3 310 aa12.81□□□□□ -0.36
SDF2-202ENST00000585428 MXRA5Q9NR99 2828 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 RNF212BA8MTL3 300 aa12.8□□□□□ -0.36
SDF2-202ENST00000585428 KIF2AO00139 706 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms